Factsheet for Bra003178.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67595	Canola	plastid	99.76	99.04
Bra007066.1-P	Field mustard	plastid	86.92	87.14
AT3G54320.1	Thale cress	plastid	81.36	76.71
Os01t0813300-00	Rice	nucleus	22.52	73.23
GSMUA_Achr8P09350_001	Banana	plastid	43.83	50.0
VIT_13s0047g00340.t01	Wine grape	plastid	44.79	49.87
Bra035137.1-P	Field mustard	nucleus	36.8	49.35
PGSC0003DMT400070735	Potato	nucleus	49.88	47.47
Bra026082.1-P	Field mustard	nucleus	37.29	46.67
Solyc01g096860.1.1	Tomato	nucleus	49.88	46.5
KRH13193	Soybean	nucleus	45.76	45.87
Zm00001d005016_P005	Maize	plastid	44.07	45.73
KRH44733	Soybean	nucleus	46.49	45.07
EES09182	Sorghum	nucleus	45.76	45.0
Os12t0126300-00	Rice	nucleus	45.28	41.93
TraesCS5D01G150500.1	Wheat	plastid	43.34	41.92
TraesCS5A01G141700.1	Wheat	plastid	43.1	41.59
HORVU5Hr1G045290.10	Barley	nucleus, plastid	43.58	41.28
GSMUA_Achr3P03630_001	Banana	plastid	41.16	41.06
GSMUA_Achr3P09410_001	Banana	nucleus	33.41	38.55
TraesCS4B01G136400.1	Wheat	plastid	30.27	37.88
Zm00001d052405_P002	Maize	plastid	38.98	37.01
KXG33588	Sorghum	plastid	34.14	35.34
TraesCS3D01G330400.1	Wheat	plastid	31.96	35.01
TraesCS4D01G131200.1	Wheat	plastid	30.02	34.93
TraesCS3B01G368400.1	Wheat	plastid	32.2	34.55
TraesCS4A01G181300.1	Wheat	plastid	30.02	34.35
Zm00001d043116_P002	Maize	nucleus	33.41	29.87
Bra024394.1-P	Field mustard	nucleus	29.3	26.95
Bra008040.1-P	Field mustard	nucleus	27.84	26.14
Bra011782.1-P	Field mustard	nucleus	32.45	24.59
Bra017852.1-P	Field mustard	nucleus	32.45	24.1
Bra018899.1-P	Field mustard	nucleus	32.2	23.79
Bra031234.1-P	Field mustard	nucleus	31.23	23.16
Bra030451.1-P	Field mustard	nucleus	31.48	23.05
Bra020444.1-P	Field mustard	nucleus	30.75	22.72
Bra006065.1-P	Field mustard	nucleus	30.51	22.66
Bra010610.1-P	Field mustard	nucleus	30.27	22.6
Bra028584.1-P	Field mustard	nucleus	30.51	22.38
Bra013978.1-P	Field mustard	nucleus	30.75	21.93
Bra009026.1-P	Field mustard	nucleus	30.02	21.6
Bra023617.1-P	Field mustard	nucleus	25.18	19.4
Bra023921.1-P	Field mustard	nucleus	15.98	14.13

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra003178
EnsemblPlants:Bra003178.1	EnsemblPlants:Bra003178.1-P	ncoils:Coil	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CG45
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PFscan:PS51257	PANTHER:PTHR32467	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000254142F	SEG:seg	:	:	:

Description

AT3G54320 (E=4e-106) WRI1, WRI, ASML1 | WRI1 (WRINKLED 1); DNA binding / transcription factor

Coordinates

chrA07:+:11707630..11711587

Molecular Weight (calculated)

46469.6 Da

IEP (calculated)

5.076

GRAVY (calculated)

-0.773

Length

413 amino acids

Sequence
(BLAST)

001: MKRPLTTCTS SSTSSSTSSS CILPNQPETP RPKRAKRAKK SSPPCDVKPQ NPTSPASARR SSIYRGVTRH RWTGRFEAHL WDKSSWNSIQ NKKGKQGAYD
101: SEEAAAHTYD LAALKYWGPD TILNFPVETY TKELDEMQRG TKEEYLASLR RQSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTYNTQEEAA
201: EAYDMAAIEY RGANAVTNFD ISNYIDRLKK KGVFPFRVEQ ATHQEAVLAE AKQEAKEEVK EHVEEEHQEA REETTEQKQE VEAVTCGVDA SGIMEMERSS
301: DSNELAWNFC MMDSGFAPFL TDQNLSNENP IEYPELFNEM MGFEDNDIDF MFEEAKNECL SLENLDCCDV VVVGRESPTS LSSSPLSCFS TDSASSTTIT
401: TTTTTSVSCN YSV

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.