CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13193	Soybean	nucleus	91.31	94.42
Os01t0813300-00	Rice	nucleus	22.3	74.8
KRH47304	Soybean	nucleus	36.62	53.79
KRH44591	Soybean	plastid	36.85	50.16
VIT_13s0047g00340.t01	Wine grape	plastid	41.08	47.17
KRH63091	Soybean	plastid	38.26	46.97
CDX78230	Canola	plastid	45.54	46.75
GSMUA_Achr8P09350_001	Banana	plastid	39.67	46.69
CDX67595	Canola	plastid	45.54	46.63
CDX73488	Canola	nucleus	45.07	46.49
Bra003178.1-P	Field mustard	plastid	45.07	46.49
Bra007066.1-P	Field mustard	plastid	44.84	46.36
KRH55024	Soybean	plastid	37.32	45.3
AT3G54320.1	Thale cress	plastid	46.24	44.98
Zm00001d005016_P005	Maize	plastid	41.31	44.22
KRH72352	Soybean	nucleus	37.56	43.84
KRH02994	Soybean	nucleus	37.32	42.97
EES09182	Sorghum	nucleus	41.55	42.14
TraesCS5D01G150500.1	Wheat	plastid	42.02	41.92
TraesCS5A01G141700.1	Wheat	plastid	41.78	41.59
Solyc01g096860.1.1	Tomato	nucleus	43.19	41.53
PGSC0003DMT400070735	Potato	nucleus	42.25	41.47
GSMUA_Achr3P03630_001	Banana	plastid	39.91	41.06
HORVU5Hr1G045290.10	Barley	nucleus, plastid	41.31	40.37
Os12t0126300-00	Rice	nucleus	42.02	40.13
GSMUA_Achr3P09410_001	Banana	nucleus	32.63	38.83
KRH01131	Soybean	nucleus	35.68	38.78
KRH40131	Soybean	nucleus	35.68	38.78
TraesCS4B01G136400.1	Wheat	plastid	29.58	38.18
KRH45852	Soybean	nucleus	34.98	36.61
KRG99157	Soybean	nucleus	34.74	36.45
Zm00001d052405_P002	Maize	plastid	36.62	35.86
KXG33588	Sorghum	plastid	33.1	35.34
TraesCS4D01G131200.1	Wheat	plastid	29.11	34.93
TraesCS3B01G368400.1	Wheat	plastid	31.46	34.81
TraesCS4A01G181300.1	Wheat	plastid	28.87	34.07
TraesCS3D01G330400.1	Wheat	plastid	30.05	33.95
Zm00001d043116_P002	Maize	nucleus	32.63	30.09
KRG99477	Soybean	nucleus	30.05	29.16
KRH45549	Soybean	nucleus	30.52	29.08
KRH19032	Soybean	nucleus	32.16	25.95
KRH74476	Soybean	nucleus	30.75	25.69
KRH39470	Soybean	nucleus	30.28	25.2
KRH24688	Soybean	nucleus	32.16	24.77
KRH02858	Soybean	nucleus	32.16	23.74
KRH34229	Soybean	nucleus	31.69	23.48
KRH29690	Soybean	nucleus	31.92	22.74
KRH28322	Soybean	nucleus	32.63	22.71
KRH06179	Soybean	nucleus	30.52	22.65
KRH77164	Soybean	nucleus	32.63	22.6
KRH47597	Soybean	nucleus	30.28	22.28
KRG88628	Soybean	nucleus	25.12	22.06
KRH15454	Soybean	nucleus	30.99	22.04
KRH58159	Soybean	nucleus	33.1	21.2
KRH61449	Soybean	nucleus	32.63	20.97
KRH52140	Soybean	nucleus	32.39	20.91
KRH04380	Soybean	nucleus	32.63	20.32
KRH40267	Soybean	nucleus	33.57	20.23
KRH00957	Soybean	nucleus	30.52	18.34

Protein Annotations

EntrezGene:100789774	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02004950	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_08G227700	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	UniProt:I1KVX7	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH44733
ProteinID:KRH44733	ProteinID:KRH44733.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002951F3B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:18539107..18543912

Molecular Weight (calculated)

48190.6 Da

IEP (calculated)

6.464

GRAVY (calculated)

-0.888

Length

426 amino acids

Sequence
(BLAST)

001: MKRSPASSCS SSTSSVGFEV HHPIEKRRPK HPRRNNLKSQ KCKQNQTTTG GRRSSIYRGV TRHRWTGRFE AHLWDKSSWN NIQSKKGKQV YLGAYDTEES
101: AARTYDLAAL KYWGKDATLN FPIETYTKDL EEMDKVSREE YLASLRRQSS GFSRGISKYR GVARHHHNGR WEARIGRVCG NKYLYLGTYK TQEEAAVAYD
201: MAAIEYRGVN AVTNFDISNY MDKIKKKNDQ TLQQQQTEVQ TETVPNSSDS EEAEVEQQHT TTITTPPPSE NLHMLPQEHQ VQYTHHVTPR DEESSSLVTI
301: MEHVLEQDLP WSFMYTGLSQ FQDPNLALSK GDDDLAGMFD GAGFEEDIDF LFSTQPGDHE TESDVNNMSA VLDSVECGDT NGAGGRSMVY HHVDNNNKQK
401: KMLSFASSSS PSSTTTTVSC DYALDL

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.