CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02858	Soybean	nucleus	92.8	84.92
PGSC0003DMT400035807	Potato	nucleus	38.64	62.96
VIT_11s0052g00840.t01	Wine grape	nucleus	59.47	62.67
GSMUA_Achr9P13660_001	Banana	nucleus	49.24	59.63
Solyc07g018290.2.1	Tomato	nucleus	50.38	56.84
GSMUA_Achr3P05070_001	Banana	nucleus	47.92	55.6
KRH47304	Soybean	nucleus	25.95	47.24
KRG99477	Soybean	nucleus	37.31	44.87
KRH45549	Soybean	nucleus	37.5	44.3
KRH44591	Soybean	plastid	25.76	43.45
CDY42263	Canola	nucleus	44.13	42.44
CDY47943	Canola	nucleus	43.94	41.8
AT5G57390.1	Thale cress	nucleus	43.75	41.4
Bra020444.1-P	Field mustard	nucleus	43.56	41.14
KRH74476	Soybean	nucleus	37.69	39.02
KRH24688	Soybean	nucleus	40.53	38.7
KRH39470	Soybean	nucleus	37.5	38.67
KRH34229	Soybean	nucleus	40.91	37.57
KRH55024	Soybean	plastid	24.81	37.32
KRH63091	Soybean	plastid	24.43	37.18
KRH72352	Soybean	nucleus	25.38	36.71
KRH40131	Soybean	nucleus	26.89	36.22
KRH01131	Soybean	nucleus	26.89	36.22
KRH02994	Soybean	nucleus	25.38	36.22
KRH29690	Soybean	nucleus	40.15	35.45
KRH06179	Soybean	nucleus	38.45	35.37
KRH47597	Soybean	nucleus	38.07	34.72
KRH13193	Soybean	nucleus	26.33	33.74
KRG99157	Soybean	nucleus	25.19	32.76
KRH45852	Soybean	nucleus	25.0	32.43
KRH40267	Soybean	nucleus	43.37	32.39
KRH44733	Soybean	nucleus	25.95	32.16
KRH15454	Soybean	nucleus	35.8	31.55
KRG88628	Soybean	nucleus	28.79	31.34
KRH28322	Soybean	nucleus	35.8	30.88
KRH77164	Soybean	nucleus	35.8	30.73
KRH52140	Soybean	nucleus	37.88	30.3
KRH61449	Soybean	nucleus	37.69	30.02
KRH58159	Soybean	nucleus	36.74	29.17
KRH00957	Soybean	nucleus	38.83	28.91
KRH04380	Soybean	nucleus	36.36	28.07

Protein Annotations

EntrezGene:100797828	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02008159	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_13G096900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	UniProt:I1LVQ8	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH19032
ProteinID:KRH19032	ProteinID:KRH19032.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0001EDA826	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:21189581..21193427

Molecular Weight (calculated)

56970.2 Da

IEP (calculated)

7.981

GRAVY (calculated)

-0.619

Length

528 amino acids

Sequence
(BLAST)

001: MDSCSSPPNN NSLAFSLSNH FPNPSSSPLS LFHSFTYPSL SLTGSHTADA PPEPIAGGGA TNLSIFTGAP KFEDFLGGSS ATATATTCAP PQLPQFSTDN
101: NNHLYDSELK TTIAACFPRA FAAEPTTEPQ KPSPKKTVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ VYLGGYDKED KAARAYDLAA
201: LKYWGPTTTT NFPISNYEKE LEEMKNMTRQ EFVASLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL
301: NAVTNFDMSR YDVKSIANST LPIGGLSGKN KNSTDSASES KSHEASRSDE RDPSAASSVT FASQQQPSSS TLSFAIPIKQ DPSDYWSILG YHNSPLDNTG
401: IRNTTSVTAT SFPSSNNGTT SSLTPFHMEF SNAPTSTGSD NDAAFFSGGG IFVQQQSGHG NGHGSGSSGS SSSSLSCSIP FATPIFSLNS NTSYENSAGY
501: GNWIGPTLHT FQSHAKPSLF QTPIFGME

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.