CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40131	Soybean	nucleus	91.33	91.33
VIT_14s0108g00050.t01	Wine grape	nucleus	66.58	64.6
Solyc06g066390.1.1	Tomato	nucleus	56.89	55.06
KRH45852	Soybean	nucleus	55.87	53.81
KRG99157	Soybean	nucleus	55.36	53.45
PGSC0003DMT400006170	Potato	nucleus	54.34	52.46
Os06t0145700-00	Rice	nucleus	42.86	52.17
KRH47304	Soybean	nucleus	37.5	50.69
Solyc08g076380.1.1	Tomato	nucleus	53.32	48.05
TraesCS1D01G362500.1	Wheat	nucleus	50.26	47.93
HORVU1Hr1G080350.3	Barley	nucleus	49.49	47.9
TraesCS4A01G395400.1	Wheat	nucleus	49.49	47.43
Os05t0536250-00	Rice	nucleus	52.04	47.33
TraesCS7D01G091100.1	Wheat	nucleus	49.49	47.32
TraesCS7A01G095100.1	Wheat	nucleus	49.23	47.3
KRH44591	Soybean	plastid	37.76	47.28
TraesCS1A01G357800.1	Wheat	nucleus	49.74	47.22
Zm00001d011134_P001	Maize	nucleus	50.0	46.67
KRH63091	Soybean	plastid	41.07	46.4
KRH55024	Soybean	plastid	40.82	45.58
KRH72352	Soybean	nucleus	42.35	45.48
EES19874	Sorghum	nucleus	51.28	45.37
KRH02994	Soybean	nucleus	41.33	43.78
EER89186	Sorghum	nucleus	48.21	38.73
Zm00001d045378_P001	Maize	nucleus	47.96	38.29
KRH13193	Soybean	nucleus	38.52	36.65
KRH44733	Soybean	nucleus	38.78	35.68
KRG99477	Soybean	nucleus	31.63	28.25
KRH45549	Soybean	nucleus	31.63	27.74
KRH19032	Soybean	nucleus	36.22	26.89
KRH02858	Soybean	nucleus	36.48	24.78
KRH74476	Soybean	nucleus	32.14	24.71
KRH24688	Soybean	nucleus	34.18	24.23
KRH39470	Soybean	nucleus	31.63	24.22
KRH06179	Soybean	nucleus	34.95	23.87
KRH34229	Soybean	nucleus	34.95	23.83
KRH47597	Soybean	nucleus	34.18	23.14
KRH15454	Soybean	nucleus	34.18	22.37
KRH77164	Soybean	nucleus	34.95	22.28
KRH28322	Soybean	nucleus	34.69	22.22
KRH29690	Soybean	nucleus	33.67	22.07
KRG88628	Soybean	nucleus	26.28	21.24
KRH58159	Soybean	nucleus	35.97	21.2
KRH04380	Soybean	nucleus	36.22	20.76
KRH52140	Soybean	nucleus	34.95	20.76
KRH61449	Soybean	nucleus	34.69	20.51
KRH40267	Soybean	nucleus	36.22	20.08
KRH00957	Soybean	nucleus	32.4	17.91

Protein Annotations

EntrezGene:100779867	MapMan:15.5.7.3	MapMan:26.9.2.2	Gene3D:3.30.730.10	EMBL:ACUP02011501	InterPro:AP2-like_transcript_factor
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_18G256000	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7MUQ8
EnsemblPlants:KRH01131	ProteinID:KRH01131	ProteinID:KRH01131.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF71	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295CE11	SEG:seg

Description

hypothetical protein

Coordinates

chr18:+:54212717..54215640

Molecular Weight (calculated)

44616.9 Da

IEP (calculated)

6.809

GRAVY (calculated)

-0.753

Length

392 amino acids

Sequence
(BLAST)

001: MVMMKENIIE EKLGRSQMSM VEGEFQGTWG VKRRRREVAA AASSGDDNHH QQLPQQEVGE NSSISTTKRS SRFRGVSRHR WTGRYEAHLW DKLSWNITQK
101: KKGKQVYLGA YDEEESAARA YDLAALKYWG NSTFTNFPIS DYEKEIEIMQ TMTKEEYLAT LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL
201: YLGTYSTQEE AARAYDIAAI EYRGIHAVTN FDLSTYIKWL KPSGGGTPEE NLESHAVLEH QKLASPSNYA LTEESKSLVL PNSFISPDSL DSPVKHESFG
301: NKTYQFSRNK SSSPTALGLL LRSSLFRELV EKNSNVSGEE ADGEVTKDQQ PQLASDDDLD GIFFDSFGDI PFVCDPTRYN LELQERDLHS IF

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.