CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40267	Soybean	nucleus	89.0	89.25
CDY68823	Canola	nucleus	25.25	52.8
CDY16924	Canola	nucleus	26.09	48.94
PGSC0003DMT400041881	Potato	nucleus	35.26	48.83
KRH34229	Soybean	nucleus	38.93	48.0
Bra023617.1-P	Field mustard	nucleus	36.11	47.76
AT5G17430.1	Thale cress	nucleus	38.65	46.92
CDY55941	Canola	nucleus	36.67	46.59
Bra013978.1-P	Field mustard	nucleus	37.94	46.46
CDX85454	Canola	nucleus	37.24	46.4
Solyc11g008560.1.1	Tomato	nucleus	43.02	45.05
KRG99477	Soybean	nucleus	26.66	43.05
KRH45549	Soybean	nucleus	27.08	42.95
KRH24688	Soybean	nucleus	32.72	41.95
KRH74476	Soybean	nucleus	28.91	40.2
KRH39470	Soybean	nucleus	28.91	40.04
Os11t0295900-01	Rice	nucleus	31.31	39.71
KRH47304	Soybean	nucleus	16.22	39.66
KRH29690	Soybean	nucleus	33.0	39.13
KRH19032	Soybean	nucleus	28.91	38.83
KRH06179	Soybean	nucleus	29.9	36.93
KRH47597	Soybean	nucleus	29.76	36.44
KRH44591	Soybean	plastid	16.08	36.42
KRH02858	Soybean	nucleus	29.05	35.7
KRH55024	Soybean	plastid	17.35	35.04
KRH63091	Soybean	plastid	17.07	34.87
KRG88628	Soybean	nucleus	23.27	34.02
KRH72352	Soybean	nucleus	17.49	33.97
KRH61449	Soybean	nucleus	31.73	33.94
KRH02994	Soybean	nucleus	17.49	33.51
KRH52140	Soybean	nucleus	31.03	33.33
KRH15454	Soybean	nucleus	28.07	33.22
KRH40131	Soybean	nucleus	18.05	32.65
KRH01131	Soybean	nucleus	17.91	32.4
KRH58159	Soybean	nucleus	30.04	32.03
KRH77164	Soybean	nucleus	27.64	31.87
KRH13193	Soybean	nucleus	18.48	31.8
KRH04380	Soybean	nucleus	30.47	31.58
KRH28322	Soybean	nucleus	27.22	31.54
KRG99157	Soybean	nucleus	18.05	31.53
KRH45852	Soybean	nucleus	18.05	31.45
KRH44733	Soybean	nucleus	18.34	30.52

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A0R0F3L3	EMBL:ACUP02011484	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_18G244600	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH00957	ProteinID:KRH00957
ProteinID:KRH00957.1	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF48	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0006ED6F63	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:53236145..53240803

Molecular Weight (calculated)

77516.8 Da

IEP (calculated)

6.638

GRAVY (calculated)

-0.682

Length

709 amino acids

Sequence
(BLAST)

001: MGSMNLLGFS LSPQEHPSSQ DHSQTAPSRF CFNPDGISST DVAGDCFDLT SDSTPHLLNL PSYGIYEAFH RSNNIHTTQD WKENYNSQNL LLGTSCSNQN
101: MNHNHQQQQQ QQPKLENFLG GHSFGEHEQP YGGNSASTEY MFPAQPVLAG GGGGGSNSSN TSNSSSIGLS MIKTWLRNQP PHSENNNNNN NESGGNSRSS
201: VQQTLSLSMS TGSQSSTSLP LLTASVDNGE SSSDNKQPHT TAALDTTQTG AIETAPRKSI DTFGQRTSIY RGVTSIILTW CSSSQHSLYG VMAFFNKHCL
301: AVYLGGYDKE EKAARAYDLA ALKYWGTTTT TNFPISHYEK ELEEMKHMTR QEYVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT
401: FSTQEEAAEA YDVAAIKFRG LSAVTNFDMS RYDVKSILES TTLPIGGAAK RLKDMEQVEL RVENVHRADQ EDHSSIMNSH LTQGIINNYA AGGTTATHHH
501: NWHNALAFHQ PQPCTTIHYP YGQRINWCKQ EQDNSDASHS LSYSDIHQLQ LGNNGTHNFF HTNSGLHPML SMDSASIDNS SSSNSVVYDG YGGGGGYNVI
601: PMGTTTTVVA NDGDQNPRSN HGFGDNEIKA LGYESVYGST TDPYHAHARN LYYLTQQQPS SVDAVKASAY DQGSACNTWV PTAIPTHAPR SSTSMALCHG
701: ATPFSLLHE

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.