Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023617.1-P | Field mustard | nucleus | 92.44 | 98.13 |
| CDY55941 | Canola | nucleus | 91.74 | 93.55 |
| CDY68823 | Canola | nucleus | 47.63 | 79.94 |
| AT5G17430.1 | Thale cress | nucleus | 81.55 | 79.45 |
| CDY16924 | Canola | nucleus | 49.56 | 74.6 |
| CDY33356 | Canola | nucleus | 17.93 | 53.12 |
| CDY72251 | Canola | nucleus | 29.17 | 50.92 |
| CDY72154 | Canola | nucleus | 29.35 | 50.76 |
| CDY68782 | Canola | nucleus | 28.82 | 50.62 |
| CDY18032 | Canola | nucleus | 25.31 | 49.66 |
| CDX72655 | Canola | endoplasmic reticulum, golgi | 28.82 | 49.1 |
| CDX78387 | Canola | nucleus | 33.74 | 47.76 |
| CDX97022 | Canola | nucleus | 33.39 | 46.45 |
| CDY14577 | Canola | nucleus | 36.2 | 45.37 |
| CDX88560 | Canola | nucleus | 23.02 | 42.39 |
| PGSC0003DMT400041881 | Potato | nucleus | 38.14 | 42.38 |
| CDY49856 | Canola | nucleus | 33.39 | 41.58 |
| CDX82142 | Canola | nucleus | 33.22 | 41.36 |
| CDY35066 | Canola | nucleus | 23.73 | 40.91 |
| CDX87360 | Canola | nucleus | 22.5 | 40.76 |
| Os11t0295900-01 | Rice | nucleus | 39.89 | 40.61 |
| CDY29623 | Canola | nucleus | 40.07 | 40.57 |
| CDY35571 | Canola | nucleus | 39.72 | 40.14 |
| CDY08784 | Canola | nucleus | 36.03 | 40.12 |
| CDY57915 | Canola | nucleus | 39.37 | 39.72 |
| CDY40102 | Canola | nucleus | 38.84 | 39.68 |
| CDY06387 | Canola | nucleus | 38.84 | 39.46 |
| Solyc11g008560.1.1 | Tomato | nucleus | 46.92 | 39.44 |
| CDX69826 | Canola | nucleus | 38.14 | 38.75 |
| CDY42263 | Canola | nucleus | 36.73 | 38.07 |
| CDX85757 | Canola | nucleus | 38.66 | 38.0 |
| CDY19597 | Canola | nucleus | 38.84 | 37.59 |
| CDY47943 | Canola | nucleus | 36.56 | 37.48 |
| KRH00957 | Soybean | nucleus | 46.4 | 37.24 |
| CDX75673 | Canola | nucleus | 34.62 | 35.95 |
| CDX69324 | Canola | nucleus | 34.45 | 35.32 |
| CDY44027 | Canola | nucleus | 33.57 | 34.17 |
| CDY50260 | Canola | nucleus | 33.57 | 34.11 |
| CDX73488 | Canola | nucleus | 23.02 | 31.72 |
| CDX78230 | Canola | plastid | 22.85 | 31.33 |
| CDX67595 | Canola | plastid | 22.5 | 30.77 |
| CDY71263 | Canola | nucleus | 12.83 | 22.39 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078DAZ3 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX85454 | ProteinID:CDX85454 | ProteinID:CDX85454.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00143151001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF72 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EED9D3 | SEG:seg | : | : | : |
Description
BnaA02g03590D
Coordinates
chrLK031842:+:186175..189227
Molecular Weight (calculated)
62419.4 Da
IEP (calculated)
6.428
GRAVY (calculated)
-0.738
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNNWLGFSL SPSDQNIHRT GVVDSSTATT AVDVTGEYCY DMTAASDESS AVRTSFPSPF GVVLDAFTRD NNSHSRDWDI NGGACNNIHS NDQNEPKLEN
101: FFGRTTTIYN NSENGGDGNG GCGGGDGAGG SLGLSMIKTW LTNQPVSNVD HQENNGNAAR GLSLSMNSST TCDSNKYNNR NNVVQEKTNV DSVDATPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQARK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPITEY EKEVEDMNHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLTAVTNFE MSRYNVKAIL DSPSLPIGSS AKRLKEVNHP
401: VPSMMINNNV SESENDASGW QNAAVQHHHG IDLSLLQQHQ ERYNNYYNGG SARAYFKEEE DQHHFLSNSP SLMANIDQHS SASGDMVTVY GNVGGYGGHQ
501: GLAIPVGTSL NCDTLAAAEI AYDARNHYYF AQQQQGGGFP VGISNNVGSN MYFNGEGGGE GAFTVWNNT
101: FFGRTTTIYN NSENGGDGNG GCGGGDGAGG SLGLSMIKTW LTNQPVSNVD HQENNGNAAR GLSLSMNSST TCDSNKYNNR NNVVQEKTNV DSVDATPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQARK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPITEY EKEVEDMNHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLTAVTNFE MSRYNVKAIL DSPSLPIGSS AKRLKEVNHP
401: VPSMMINNNV SESENDASGW QNAAVQHHHG IDLSLLQQHQ ERYNNYYNGG SARAYFKEEE DQHHFLSNSP SLMANIDQHS SASGDMVTVY GNVGGYGGHQ
501: GLAIPVGTSL NCDTLAAAEI AYDARNHYYF AQQQQGGGFP VGISNNVGSN MYFNGEGGGE GAFTVWNNT
001: MNSMNNWLGF SLSPHDQNHH RTDVDSSTTR TAVDVAGGYC FDLAAPSDES SAVQTSFLSP FGVTLEAFTR DNNSHSRDWD INGGACNNIN NNEQNGPKLE
101: NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP
401: VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS
501: YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT
101: NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP
401: VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS
501: YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT
Arabidopsis Description
BBMBABY BOOM [Source:UniProtKB/TrEMBL;Acc:A7L9U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.