CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47943	Canola	nucleus	94.72	93.69
Bra020444.1-P	Field mustard	nucleus	94.72	93.02
AT5G57390.1	Thale cress	nucleus	86.52	85.13
CDY33356	Canola	nucleus	18.03	51.56
PGSC0003DMT400035807	Potato	nucleus	30.42	51.54
CDX72655	Canola	endoplasmic reticulum, golgi	30.6	50.3
CDY72154	Canola	nucleus	29.87	49.85
CDY72251	Canola	nucleus	29.33	49.39
CDY68782	Canola	nucleus	29.14	49.38
Solyc07g018290.2.1	Tomato	nucleus	42.08	49.36
CDY18032	Canola	nucleus	25.5	48.28
VIT_11s0052g00840.t01	Wine grape	nucleus	42.99	47.11
GSMUA_AchrUn_...	Banana	nucleus	39.71	46.48
CDX78387	Canola	nucleus	33.33	45.52
KRH19032	Soybean	nucleus	42.44	44.13
CDX97022	Canola	nucleus	31.69	42.54
CDY14577	Canola	nucleus	35.15	42.51
CDX88560	Canola	nucleus	23.86	42.39
CDY35066	Canola	nucleus	25.14	41.82
CDY68823	Canola	nucleus	25.68	41.59
KRH02858	Soybean	nucleus	42.99	40.9
CDX87360	Canola	nucleus	23.32	40.76
CDY49856	Canola	nucleus	33.15	39.82
CDX82142	Canola	nucleus	32.79	39.39
CDY06387	Canola	nucleus	39.16	38.39
CDY16924	Canola	nucleus	26.23	38.1
CDY57915	Canola	nucleus	38.98	37.94
CDY08784	Canola	nucleus	35.15	37.77
CDY29623	Canola	nucleus	38.43	37.54
CDY35571	Canola	nucleus	38.07	37.12
CDY55941	Canola	nucleus	37.34	36.74
CDX85454	Canola	nucleus	38.07	36.73
CDY19597	Canola	nucleus	38.98	36.39
CDY40102	Canola	nucleus	35.52	35.01
CDX75673	Canola	nucleus	34.79	34.85
CDX69826	Canola	nucleus	35.15	34.46
CDX69324	Canola	nucleus	34.43	34.05
CDX85757	Canola	nucleus	35.52	33.68
CDY44027	Canola	nucleus	33.15	32.56
CDY50260	Canola	nucleus	33.15	32.5
CDX73488	Canola	nucleus	24.41	32.45
CDX78230	Canola	plastid	24.41	32.29
CDX67595	Canola	plastid	23.68	31.25
CDY71263	Canola	nucleus	11.11	18.71

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	GO:A0A078HZQ8	UniProt:A0A078HZQ8	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	EnsemblPlants:CDY42263	ProteinID:CDY42263	ProteinID:CDY42263.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00074499001	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF72
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0004EE789B	SEG:seg	:	:

Description

BnaC02g11520DBnaC02g11520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZQ8]

Coordinates

chrLK032519:-:268069..271467

Molecular Weight (calculated)

59588.4 Da

IEP (calculated)

7.204

GRAVY (calculated)

-0.648

Length

549 amino acids

Sequence
(BLAST)

001: MKNNNNKSSS SYDSSLSPSS SSSSHQNWLS FSLSNNNNFN SSSNPNLATS TSDHPHPSHL SLFQAFSPTP VHRQDESPGA SSGDATAVLS MYPGGPKLEN
101: FLGGGASTTT GQMQQGQSLG DVVFSSNVEQ PRHPPSAAEI YDYELKSIAA SFLGNYSGGH SSEVSSGQKQ QNSPTATEVS PTPKKNVESF GQRTSIYRGV
201: TRHRWTGRYE AHLWDNSCRR EGQSRKGRQV YLGGYDKEDK AARAYDLAAL KYWGPTTTTN FPISNYELEL EEMKHMTRQE FVASLRRKSS GFSRGASMYR
301: GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGLN AVTNFDISRY DVKSIASCNL PVGGLNSKPS PVTPALDKQV DISPSDPPSL
401: TTPSLTFNVA TPVHDHEGTF FHIGIPIKQD PAAHYWSNVF GFPPNLKTET RPVATFGSDL HNFSSGFPIM PVMQDEGNNF GGGFVESEGY NNHSAASSPV
501: SAIPLPSAVD DGNAGYGGNI NWISNNTPNS YQTAKSNLSV LQTPVFGLE

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.