Factsheet for Solyc07g018290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035807	Potato	nucleus	60.9	87.96
VIT_11s0052g00840.t01	Wine grape	nucleus	55.98	52.3
GSMUA_AchrUn_...	Banana	nucleus	50.85	50.75
KRH19032	Soybean	nucleus	56.84	50.38
KRH02858	Soybean	nucleus	57.05	46.27
CDY42263	Canola	nucleus	49.36	42.08
AT5G57390.1	Thale cress	nucleus	49.79	41.76
CDY47943	Canola	nucleus	49.15	41.44
Bra020444.1-P	Field mustard	nucleus	48.93	40.97
Solyc06g068570.2.1	Tomato	nucleus	25.85	38.41
Solyc12g010490.1.1	Tomato	plastid	28.85	37.09
Solyc11g061750.1.1	Tomato	nucleus	43.16	36.86
Solyc03g117720.2.1	Tomato	nucleus, plastid	28.21	35.58
Solyc05g051380.2.1	Tomato	nucleus	36.75	34.33
Solyc11g010710.1.1	Tomato	nucleus	39.32	33.89
Solyc06g066390.1.1	Tomato	nucleus	28.21	32.59
Solyc11g008560.1.1	Tomato	nucleus	46.37	32.05
Solyc01g096860.1.1	Tomato	nucleus	29.27	30.93
Solyc02g092050.2.1	Tomato	nucleus	39.53	28.64
Solyc08g076380.1.1	Tomato	nucleus	26.28	28.28
Solyc04g077490.2.1	Tomato	nucleus	38.89	27.91

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	UniProt:K4CCP0	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:Solyc07g018290.2	EnsemblPlants:Solyc07g018290.2.1	UniParc:UPI000276C3CC
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:10023972..10028265

Molecular Weight (calculated)

52376.5 Da

IEP (calculated)

8.267

GRAVY (calculated)

-0.825

Length

468 amino acids

Sequence
(BLAST)

001: MDMNSSSCEK WLGFSLSNIN NLSPSTTNSS QLSLFQAFNS NPNTNCEVVR QNENGEPKVE NMLGSCCDSN TPTSCEYGSE LKRIAATFLP TTFSDDHKEK
101: LPLIVTQPKK PHESFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRRQGQSR KGRQGGYDKE EKAARAYDLA ALKYWGPTTT TNFPVSNYER ELEEMKNMTR
201: QEFVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG LNAVTNFDIS RYDVKSIASS NLPVGGMSNK
301: SKSSSDETTK HVENRPNLRD QDQDRDISSA PNYTSKNLAM VNLGFGLPIK QDAFDFWSSV GYNNNRSKNG LLFQGTTMNA QGTTFFSNEV NNSSVMLNEQ
401: GYDNHDQQQQ SGGSSCEINM ALNSNIATTS TTIDSTNFGN WMTPSLHSFQ SSTKNDLGPY HTPIFGME

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.