Factsheet for Bra020444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47943	Canola	nucleus	97.5	98.2
CDY42263	Canola	nucleus	93.02	94.72
AT5G57390.1	Thale cress	nucleus	86.23	86.38
PGSC0003DMT400035807	Potato	nucleus	29.7	51.23
Solyc07g018290.2.1	Tomato	nucleus	40.97	48.93
VIT_11s0052g00840.t01	Wine grape	nucleus	41.86	46.71
GSMUA_AchrUn_...	Banana	nucleus	39.0	46.48
KRH19032	Soybean	nucleus	41.14	43.56
Bra024394.1-P	Field mustard	nucleus	34.17	42.54
Bra035137.1-P	Field mustard	nucleus	23.08	41.88
Bra026082.1-P	Field mustard	nucleus	23.97	40.61
KRH02858	Soybean	nucleus	41.68	40.38
Bra008040.1-P	Field mustard	nucleus	31.31	39.77
Bra018899.1-P	Field mustard	nucleus	38.82	38.82
Bra031234.1-P	Field mustard	nucleus	37.75	37.88
Bra030451.1-P	Field mustard	nucleus	37.57	37.23
Bra013978.1-P	Field mustard	nucleus	38.28	36.96
Bra006065.1-P	Field mustard	nucleus	35.06	35.25
Bra011782.1-P	Field mustard	nucleus	33.45	34.31
Bra028584.1-P	Field mustard	nucleus	34.53	34.28
Bra009026.1-P	Field mustard	nucleus	33.99	33.1
Bra017852.1-P	Field mustard	nucleus	32.92	33.09
Bra023617.1-P	Field mustard	nucleus	31.31	32.65
Bra010610.1-P	Field mustard	nucleus	31.48	31.83
Bra007066.1-P	Field mustard	plastid	23.26	31.55
Bra003178.1-P	Field mustard	plastid	22.72	30.75
Bra023921.1-P	Field mustard	nucleus	22.0	26.34

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra020444
EnsemblPlants:Bra020444.1	EnsemblPlants:Bra020444.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719	GO:GO:0009790
GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0010311	GO:GO:0040019	GO:GO:0048364
GO:GO:0060771	GO:GO:0060772	GO:GO:0060774	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4DVA0
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF72	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0002545EF2	SEG:seg	:	:	:

Description

AT5G57390 (E=1e-225) AIL5, CHO1 | AIL5 (AINTEGUMENTA-LIKE 5); DNA binding / transcription factor

Coordinates

chrA02:+:6808091..6811027

Molecular Weight (calculated)

60772.6 Da

IEP (calculated)

7.542

GRAVY (calculated)

-0.720

Length

559 amino acids

Sequence
(BLAST)

001: MKNNNNKSSS SYDSSLSPSS SSSSHQNWLS FSLSNNNNFN SSSNPNLATS TSDHHHHHHH HPHPSHVSLF QAFSTTPVHR HDESPGASSS DATAVLSMYP
101: GGPKLENFLG GGATTTTTGE MQQGQSLGGV VFSSNVEQPR HPPSAAEIYD YELKSIAASF LGNYSGGHSS EVSSGQKQQH NPPTATEASP TPKKNVESFG
201: QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQSRKGRQVY LGGYDKEDKA ARAYDLAALK YWGPTTTMNF SISNYEPELE EMKHMTRQEF VASLRRKSSG
301: FSRGASMYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDISRYD VKSIASCNLP VGGLNPKPSP VTPAPDKQVD
401: ISPSDPPSLT TPSLTFNAAT PVHDHEGAFF HTGIPIKQDP AAHYWSNVFG FPPNLKTETR PIATFGSDLH STSPGFTVMP VMQDGGNNFG GGFVESEGYN
501: NNHSAASSPV SAIPLPSTVD NSNEGYGGNI NWISNNTSNS YQTAKSNLSV LQTPVFGLE

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.