Factsheet for Bra017852.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71263	Canola	nucleus	56.12	95.71
Bra011782.1-P	Field mustard	nucleus	89.39	91.19
AT4G37750.1	Thale cress	nucleus	87.77	87.93
Bra010610.1-P	Field mustard	nucleus	87.23	87.7
CDX72655	Canola	endoplasmic reticulum, golgi	51.08	85.03
GSMUA_Achr8P26510_001	Banana	nucleus	36.51	60.06
PGSC0003DMT400055210	Potato	nucleus	26.44	51.4
Os07t0124700-01	Rice	nucleus	28.78	48.34
GSMUA_Achr3P15150_001	Banana	nucleus	46.4	46.82
GSMUA_Achr3P30690_001	Banana	nucleus	47.66	45.45
KRH58159	Soybean	nucleus	53.78	44.96
VIT_07s0151g00440.t01	Wine grape	nucleus	54.68	44.84
Solyc02g092050.2.1	Tomato	nucleus	51.8	44.58
GSMUA_Achr7P27500_001	Banana	nucleus	49.28	44.48
KRH77164	Soybean	nucleus	48.38	43.74
Bra008040.1-P	Field mustard	nucleus	34.53	43.64
KRH28322	Soybean	nucleus	48.02	43.63
KRH04380	Soybean	nucleus	53.6	43.57
TraesCS2B01G268100.2	Wheat	nucleus	46.22	42.83
TraesCS2D01G256600.2	Wheat	nucleus	46.22	42.83
Zm00001d007840_P001	Maize	nucleus	46.22	42.83
TraesCS2A01G267600.2	Wheat	nucleus	46.04	42.6
Zm00001d018731_P001	Maize	nucleus	46.58	42.25
Bra035137.1-P	Field mustard	nucleus	22.3	40.26
TraesCS5D01G415500.1	Wheat	nucleus	44.96	39.94
EER93382	Sorghum	nucleus	46.4	39.81
TraesCS5B01G410200.1	Wheat	nucleus	44.96	39.81
TraesCS5A01G405400.1	Wheat	nucleus	44.96	39.75
Zm00001d034204_P001	Maize	nucleus	47.66	39.61
Bra026082.1-P	Field mustard	nucleus	23.2	39.09
HORVU5Hr1G098450.2	Barley	nucleus	43.7	38.51
KXG34322	Sorghum	nucleus	47.12	38.47
Bra024394.1-P	Field mustard	nucleus	30.58	37.86
Bra018899.1-P	Field mustard	nucleus	35.43	35.24
Bra013978.1-P	Field mustard	nucleus	36.33	34.89
Bra030451.1-P	Field mustard	nucleus	35.25	34.75
Bra031234.1-P	Field mustard	nucleus	33.99	33.93
Bra020444.1-P	Field mustard	nucleus	33.09	32.92
Bra007066.1-P	Field mustard	plastid	24.28	32.77
Bra028584.1-P	Field mustard	nucleus	33.09	32.68
Bra006065.1-P	Field mustard	nucleus	32.55	32.55
Bra003178.1-P	Field mustard	plastid	24.1	32.45
Bra009026.1-P	Field mustard	nucleus	32.19	31.18
Bra023617.1-P	Field mustard	nucleus	30.04	31.16
Bra023921.1-P	Field mustard	nucleus	19.96	23.77

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra017852
EnsemblPlants:Bra017852.1	EnsemblPlants:Bra017852.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4DMW5	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002540D5F	SEG:seg	:	:	:	:

Description

AT4G37750 (E=4e-222) ANT, DRG, CKC, CKC1 | ANT (AINTEGUMENTA); DNA binding / transcription factor

Coordinates

chrA03:+:30966132..30968584

Molecular Weight (calculated)

61332.9 Da

IEP (calculated)

7.317

GRAVY (calculated)

-0.722

Length

556 amino acids

Sequence
(BLAST)

001: MKSFCDNDDN NHGNTTNLLG FSLSSNMLKM GGGGGEEALY SSSSAAATSS SVPPQLVVGD NSSNYGVCYG SNSAAGGMYS QMSVMPLRSD GSLCLMEALN
101: RSSHSNQHHH AQVSSPKMED FFGTHHSNTS NKEAMDLSLD SLFYNTTHEP NNNTNFQEFF SFPQARNHHE EETRSYQNDP GLTHGGGSFN VGVYGEFQQS
201: LSLSMSPGSQ SSCIPGTPHH QNQNNQAQNH HQISEALGVE TSVGFETTTM AAAAKKKRGQ EEVMVVGQKQ IAHRKSIDTF GQRTSQYRGV TRHRWTGRYE
301: AHLWDNSFKK EGHSRKGRQG GYDMEEKAAR AYDLAALKYW GPSTHTNFSV ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMASNTLLS GELARRNINS IVVRNNNNEE NAVNAVVDGG LNKEVSSPER
501: ELSFPAIFTL PQVGQKMFGA NMVGNMSSWT TNPGAELKAV SHTLPQMPVF AAWADS

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.