Factsheet for Zm00001d034204_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93382	Sorghum	nucleus	80.72	83.33
TraesCS5D01G415500.1	Wheat	nucleus	62.93	67.25
TraesCS5B01G410200.1	Wheat	nucleus	62.93	67.04
TraesCS5A01G405400.1	Wheat	nucleus	61.88	65.82
HORVU5Hr1G098450.2	Barley	nucleus	61.44	65.13
GSMUA_Achr4P32280_001	Banana	nucleus	39.76	62.88
CDX72655	Canola	endoplasmic reticulum, golgi	28.55	57.19
PGSC0003DMT400055210	Potato	nucleus	23.92	55.94
Zm00001d018731_P001	Maize	nucleus	50.37	54.98
Zm00001d007840_P001	Maize	nucleus	49.18	54.83
GSMUA_Achr7P00740_001	Banana	nucleus	43.65	53.97
CDX75673	Canola	nucleus	40.51	49.45
Bra011782.1-P	Field mustard	nucleus	40.21	49.36
VIT_18s0001g08610.t01	Wine grape	nucleus	49.33	48.96
CDX69324	Canola	nucleus	39.76	47.93
AT4G37750.1	Thale cress	nucleus	39.76	47.93
VIT_07s0151g00440.t01	Wine grape	nucleus	48.43	47.79
Bra017852.1-P	Field mustard	nucleus	39.61	47.66
KRG88628	Soybean	nucleus	34.53	47.63
Solyc04g077490.2.1	Tomato	nucleus	46.04	47.24
PGSC0003DMT400012588	Potato	nucleus	46.04	47.17
CDY50260	Canola	nucleus	39.31	46.96
Solyc02g092050.2.1	Tomato	nucleus	45.14	46.75
CDY44027	Canola	nucleus	39.01	46.69
KRH61449	Soybean	nucleus	46.19	46.61
KRH52140	Soybean	nucleus	45.89	46.52
Bra010610.1-P	Field mustard	nucleus	38.12	46.11
KRH15454	Soybean	nucleus	40.96	45.74
KRH58159	Soybean	nucleus	45.14	45.41
KRH77164	Soybean	nucleus	41.41	45.04
KRH28322	Soybean	nucleus	41.11	44.93
KRH04380	Soybean	nucleus	45.29	44.3
Zm00001d048004_P001	Maize	nucleus	42.45	43.16
Zm00001d028919_P001	Maize	extracellular, nucleus	25.26	39.76
Zm00001d046913_P001	Maize	nucleus	28.55	39.38
CDY71263	Canola	nucleus	18.39	37.73
Zm00001d027878_P002	Maize	nucleus	29.75	36.85
Zm00001d005016_P005	Maize	plastid	20.33	34.17
Zm00001d017207_P001	Maize	nucleus	32.88	32.54
Zm00001d020540_P002	Maize	plastid	19.58	31.87
Zm00001d042492_P001	Maize	nucleus	33.03	31.3
Zm00001d011134_P001	Maize	nucleus	19.43	30.95
Zm00001d032144_P001	Maize	nucleus	18.68	30.86
Zm00001d052405_P002	Maize	plastid	17.64	27.13
Zm00001d043116_P002	Maize	nucleus	18.68	27.06
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	28.4	26.69
Zm00001d045378_P001	Maize	nucleus	19.58	26.68

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6L665	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM09799.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000844B63E	EnsemblPlantsGene:Zm00001d034204
EnsemblPlants:Zm00001d034204_P001	EnsemblPlants:Zm00001d034204_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 184AP2-like ethylene-responsive transcription factor ANT

Coordinates

chr1:+:286726372..286730435

Molecular Weight (calculated)

70468.9 Da

IEP (calculated)

7.585

GRAVY (calculated)

-0.404

Length

669 amino acids

Sequence
(BLAST)

001: MTSNSSQNMS SCSTGGSDAA VGGGSWLGFS LSPHMAATMD GAADGVPVQH HHHEGLFYPP VVSSSPAPFC YALGGGQDGL ATAAANGGGG FYPGLSSMPL
101: KSDGSLCILE ALHRSEQERH GVVVSSSSPK LEDFLGASAS TAMALSLDSS SFYYGCGHGH GHDQGGYLQP MQCAVMPGSG GHDVYGGGHA QMVDEQSAAA
201: MAASWFSARG NGGYDVDGAG AGAIVPLQGH PHPLALSMSS GTGSQSSSVT MQVGSAHADA VTEYIAMDGS KKRGAGNGAS AGQKQPTIHR KTIDTFGQRT
301: SQYRGVTRHR WTGRYEAHLW DNSCRKEGQT RKGRQGGYDV EEKAARAYDL AALKYWGTST HVNFPVEDYR EELEEMKNMT RQEYVAHLRR KSSGFSRGAS
401: IYRGVTRFVH HGPRTAGSYQ CQTHSPFARR FTETNASISR RHHQHGRWQA RIGRVSGNKD LYLGTFSTQE EAAEAYDVAA IKFRGLSAVT NFDITRYDVD
501: KIMESSTLLP GEQVRRRKEG ADAAVSEAAA ALVQAGNCMT DTWKIQAALP AAARADERGA GQQQRQDLLS SEAFSLLHDI VSVDAAAGTG TGGMSNASSS
601: LAPSVSNSRE QSPDRGGASL AMLFAKPAAA PKLACPLPLG SWVSPSAVSA RPPGVSIAHL PVFAAWTDA

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.