Factsheet for Zm00001d017207_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30667	Sorghum	nucleus	95.86	93.91
Os02t0614300-01	Rice	mitochondrion, nucleus	39.94	84.11
TraesCS6B01G252000.1	Wheat	nucleus	78.85	80.51
TraesCS6D01G205300.1	Wheat	nucleus	78.25	80.03
HORVU6Hr1G057060.3	Barley	nucleus	77.07	79.91
TraesCS6A01G229500.1	Wheat	nucleus	77.66	79.67
Os04t0504500-01	Rice	nucleus	67.16	69.0
HORVU2Hr1G087310.1	Barley	nucleus	66.27	67.98
TraesCS2D01G357600.1	Wheat	nucleus	65.53	67.63
TraesCS2B01G378100.1	Wheat	nucleus	65.83	67.42
GSMUA_Achr2P05880_001	Banana	nucleus	46.89	55.42
CDY68782	Canola	nucleus	26.04	54.32
CDY72251	Canola	nucleus	24.7	51.23
CDY72154	Canola	nucleus	24.7	50.76
VIT_06s0004g01800.t01	Wine grape	nucleus	38.17	46.91
Zm00001d046913_P001	Maize	nucleus	33.28	46.39
KRH24688	Soybean	nucleus	37.87	46.29
Solyc11g061750.1.1	Tomato	nucleus	36.83	45.44
PGSC0003DMT400035354	Potato	nucleus	36.83	45.19
Bra031234.1-P	Field mustard	nucleus	36.24	43.99
CDY06387	Canola	nucleus	36.24	43.75
CDY57915	Canola	nucleus	36.24	43.44
AT3G20840.1	Thale cress	nucleus	36.39	42.86
Bra018899.1-P	Field mustard	nucleus	35.21	42.58
AT1G51190.1	Thale cress	nucleus	35.65	42.43
CDY29623	Canola	nucleus	35.21	42.35
Bra030451.1-P	Field mustard	nucleus	35.21	42.2
KRH29690	Soybean	nucleus	37.28	42.14
CDY35571	Canola	nucleus	34.91	41.92
CDY19597	Canola	nucleus	36.39	41.84
Zm00001d042492_P001	Maize	nucleus	43.34	41.5
Zm00001d028919_P001	Maize	extracellular, nucleus	25.59	40.71
Zm00001d027878_P002	Maize	nucleus	31.95	40.0
Zm00001d018731_P001	Maize	nucleus	32.4	35.73
Zm00001d007840_P001	Maize	nucleus	31.66	35.67
Zm00001d020540_P002	Maize	plastid	20.86	34.31
Bra023921.1-P	Field mustard	nucleus	23.52	34.05
Zm00001d032144_P001	Maize	nucleus	19.97	33.33
Zm00001d034204_P001	Maize	nucleus	32.54	32.88
Zm00001d011134_P001	Maize	nucleus	20.27	32.62
Zm00001d005016_P005	Maize	plastid	19.08	32.41
Zm00001d048004_P001	Maize	nucleus	31.36	32.22
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	30.62	29.07
Zm00001d045378_P001	Maize	nucleus	20.41	28.11
Zm00001d043116_P002	Maize	nucleus	18.49	27.06
Zm00001d052405_P002	Maize	plastid	16.72	25.98

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6HD37	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQK72611.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF48	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0008455D17	EnsemblPlantsGene:Zm00001d017207
EnsemblPlants:Zm00001d017207_P001	EnsemblPlants:Zm00001d017207_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 206Protein BABY BOOM 1

Coordinates

chr5:+:188933076..188937726

Molecular Weight (calculated)

71417.7 Da

IEP (calculated)

6.295

GRAVY (calculated)

-0.596

Length

676 amino acids

Sequence
(BLAST)

001: MASANNWLGF SLSGQDNPQP NQDSSPAAGI DISGASDFYG LPTQQGSDGH LGVPGLRDDH ASYGIMEAYN RVPQETQDWN MRGLDYNGGG SELSMLVGSS
101: GGGGGNGKRA VEDSEPKLED FLGGNSFVSD QDQSGGYLFS GVPIASSANS NSGSNTMELS MIKTWLRNNQ VAQPQPPAPH QPQPEEMSTD ASGSSFGCSD
201: SMGRNSMVAA GGSSQSLALS MSTGSHLPMV VPSGAASGAA SESTSSENKR ASGAMDSPGS AVEAVPRKSI DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS
301: CRREGQSRKG RQGGYDKEDK AARAYDLAAL KYWGTTTTTN FPISNYEKEL EEMKHMTRQE YIAYLRRNSS GFSRGASKYR GVTRHHQHGR WQARIGRVAG
401: NKDLYLGTFS TEEEAAEAYD IAAIKFRGLN AVTNFDMSRY DVKSILESST LPVGGAARRL KDAVDHVEAG ATIWRADMDG AVISQLAEAG MGGYASYGHH
501: GWPTIAFQQP SPLSVHYPYG QPSRGWCKPE QDAAAAAAHS LQDLQQLHLG SAAHNFFQAS SSSTVYNGGA GASGGYQGLG GGSSFLMPSS TVVAAADQGH
601: SSTANQGSTC SYGDDHQEGK LIGYDAAMVA TAAGGDPYAA ARNGYQFSQG SGSTVSIARA NGYANNWSSP FNNGMG

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.