Factsheet for Zm00001d020540_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89519	Sorghum	plastid	80.54	83.8
Os09t0423800-01	Rice	nucleus	72.26	81.37
TraesCS5D01G229400.1	Wheat	nucleus	72.99	75.76
TraesCS5B01G220400.2	Wheat	nucleus	72.75	75.31
TraesCS5A01G221600.1	Wheat	nucleus	72.51	75.25
CDY33356	Canola	nucleus	32.12	68.75
KRH47304	Soybean	nucleus	47.2	66.9
VIT_11s0037g00870.t01	Wine grape	plastid	53.53	63.4
KRH44591	Soybean	plastid	48.18	63.26
VIT_09s0018g01650.t01	Wine grape	plastid	55.23	62.88
KRH63091	Soybean	plastid	53.04	62.82
KRH55024	Soybean	plastid	53.04	62.11
AT1G79700.2	Thale cress	nucleus	45.01	59.11
CDY35066	Canola	nucleus	47.2	58.79
Bra026082.1-P	Field mustard	nucleus	47.2	58.79
KRH72352	Soybean	nucleus	52.07	58.63
Solyc12g010490.1.1	Tomato	plastid	51.82	58.52
Solyc03g117720.2.1	Tomato	nucleus, plastid	52.8	58.49
CDX88560	Canola	nucleus	43.8	58.25
Bra035137.1-P	Field mustard	nucleus	43.55	58.12
AT1G16060.1	Thale cress	nucleus	48.42	57.68
KRH02994	Soybean	nucleus	51.34	57.03
Solyc06g068570.2.1	Tomato	nucleus	43.07	56.19
CDX87360	Canola	nucleus	42.82	56.05
PGSC0003DMT400087745	Potato	nucleus	39.9	55.78
GSMUA_Achr5P04670_001	Banana	nucleus	48.18	55.0
Zm00001d032144_P001	Maize	nucleus	48.18	48.89
Zm00001d005016_P005	Maize	plastid	39.66	40.95
Zm00001d011134_P001	Maize	nucleus	40.39	39.52
Zm00001d045378_P001	Maize	nucleus	41.85	35.03
Zm00001d052405_P002	Maize	plastid	34.31	32.41
Zm00001d043116_P002	Maize	nucleus	33.58	29.87
Zm00001d046913_P001	Maize	nucleus	33.58	28.45
Zm00001d028919_P001	Maize	extracellular, nucleus	27.98	27.06
Zm00001d027878_P002	Maize	nucleus	30.9	23.52
Zm00001d018731_P001	Maize	nucleus	33.58	22.51
Zm00001d007840_P001	Maize	nucleus	32.85	22.5
Zm00001d017207_P001	Maize	nucleus	34.31	20.86
Zm00001d042492_P001	Maize	nucleus	34.31	19.97
Zm00001d048004_P001	Maize	nucleus	31.87	19.91
Zm00001d034204_P001	Maize	nucleus	31.87	19.58
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	31.39	18.12

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6I4L1	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM55078.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF20	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000842C5E6	EnsemblPlantsGene:Zm00001d020540
EnsemblPlants:Zm00001d020540_P002	EnsemblPlants:Zm00001d020540_T002	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 143AP2-like ethylene-responsive transcription factor

Coordinates

chr7:+:121545625..121549331

Molecular Weight (calculated)

44759.2 Da

IEP (calculated)

8.864

GRAVY (calculated)

-0.586

Length

411 amino acids

Sequence
(BLAST)

001: MARPRKNSAA AANNNNSNTT NAGNAAVDLA ARVKPKRTRK SVPRESPSQR SSVYRGVTRH RWTGRFEAHL WDKNSWNESQ NKKGKQVYLG DVLLTIVSLH
101: GLHAGAYDDE DAAARAYDLA ALKYWGPDTI LNFPASAYEA ELKEMEGQSR EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV FGNKYLYLGT
201: YGTQEEAAMA YDMAAIEYRG LNAVTNFDLS RYIKWLRPGA GAAQNPHPML DGLAQQLLLS PEGTIDGAAF HQQQHDHRQQ GAAELPLPPR ASLGHTPTTS
301: ALGLLLQSSK FKEMIQRASA AESGTTTVTT TSSSSSQPPT PTPTPSPSPP PTPPVQPARD ASPQCSFPED IQTFFGCEDV AGVGAGVDVD ALFFGDLAAY
401: ASPAFHFEMD L

Best Arabidopsis Sequence Match ( AT1G16060.1 )
(BLAST)

001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC

Arabidopsis Description

ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.