CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47304	Soybean	nucleus	90.1	97.24
CDY33356	Canola	nucleus	43.45	70.83
Bra035137.1-P	Field mustard	nucleus	61.98	62.99
CDX88560	Canola	nucleus	61.98	62.78
Solyc06g068570.2.1	Tomato	nucleus	61.66	61.27
AT1G79700.2	Thale cress	nucleus	61.02	61.02
VIT_09s0018g01650.t01	Wine grape	plastid	69.97	60.66
CDX87360	Canola	nucleus	60.7	60.51
CDY35066	Canola	nucleus	62.94	59.7
Bra026082.1-P	Field mustard	nucleus	62.94	59.7
KRH63091	Soybean	plastid	65.5	59.08
KRH55024	Soybean	plastid	66.13	58.97
AT1G16060.1	Thale cress	nucleus	64.86	58.84
KRH72352	Soybean	nucleus	66.13	56.71
Solyc03g117720.2.1	Tomato	nucleus, plastid	66.77	56.33
KRH02994	Soybean	nucleus	65.81	55.68
Os09t0423800-01	Rice	nucleus	62.3	53.42
GSMUA_Achr5P04670_001	Banana	nucleus	60.7	52.78
TraesCS5B01G220400.2	Wheat	nucleus	63.58	50.13
TraesCS5A01G221600.1	Wheat	nucleus	63.26	50.0
TraesCS5D01G229400.1	Wheat	nucleus	63.26	50.0
TraesCS6B01G153800.1	Wheat	nucleus	53.04	49.26
OQU89519	Sorghum	plastid	61.98	49.11
Zm00001d020540_P002	Maize	plastid	63.26	48.18
Os08t0442400-01	Rice	nucleus	61.02	45.58
TraesCS6A01G125700.1	Wheat	nucleus	48.56	43.55
Zm00001d032144_P001	Maize	nucleus	53.04	40.99
OQU80549	Sorghum	nucleus	55.59	39.55
KRH13193	Soybean	nucleus	50.16	38.11
KRH40131	Soybean	nucleus	47.6	38.01
KRH01131	Soybean	nucleus	47.28	37.76
KRH45852	Soybean	nucleus	48.24	37.1
KRG99157	Soybean	nucleus	47.92	36.95
KRH44733	Soybean	nucleus	50.16	36.85
KRG99477	Soybean	nucleus	40.89	29.16
KRH45549	Soybean	nucleus	41.53	29.08
KRH19032	Soybean	nucleus	43.45	25.76
KRH74476	Soybean	nucleus	41.21	25.29
KRH39470	Soybean	nucleus	40.89	25.0
KRH02858	Soybean	nucleus	43.45	23.57
KRH24688	Soybean	nucleus	41.53	23.51
KRH06179	Soybean	nucleus	41.21	22.47
KRH15454	Soybean	nucleus	42.81	22.37
KRH34229	Soybean	nucleus	40.89	22.26
KRH47597	Soybean	nucleus	40.89	22.11
KRH29690	Soybean	nucleus	41.53	21.74
KRG88628	Soybean	nucleus	33.23	21.44
KRH77164	Soybean	nucleus	41.85	21.3
KRH61449	Soybean	nucleus	44.09	20.81
KRH52140	Soybean	nucleus	43.77	20.76
KRH28322	Soybean	nucleus	40.58	20.75
KRH58159	Soybean	nucleus	42.81	20.15
KRH04380	Soybean	nucleus	43.13	19.74
KRH40267	Soybean	nucleus	41.85	18.53
KRH00957	Soybean	nucleus	36.42	16.08

Protein Annotations

EntrezGene:100819898	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02004942	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_08G220800	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7L840	EnsemblPlants:KRH44591
ProteinID:KRH44591	ProteinID:KRH44591.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF20	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295492D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:17941621..17945501

Molecular Weight (calculated)

35884.4 Da

IEP (calculated)

8.176

GRAVY (calculated)

-0.940

Length

313 amino acids

Sequence
(BLAST)

001: MRVQCSGPLS FLIFMAKKSQ KSLKNNNNNN TTRKRTRKSV PRDSPPQRSS IYRGVTRHRW TGRYEAHLWD KNCWNESQSK KGRQVYLGAY DDEEAAARAY
101: DLAALKYWGQ DTILNFPLSN YEEKLKEMEG QSKEEYIGSL RRKSSGFSRG VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTYATQEEA AAAYDMAAIE
201: YRGLNAVTNF DLSRYINWPR PKTEENHQNT PSNQNVNSNA ELELGSASDE ITEEGVARSS ESESNPSRRT FPEDIQTIFE NNQDSGIYIE NDDIIFGDLG
301: SFGAPIFHFE LDV

Best Arabidopsis Sequence Match ( AT1G16060.1 )
(BLAST)

001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC

Arabidopsis Description

ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.