Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G125700.1 | Wheat | nucleus | 80.12 | 77.36 |
| CDY33356 | Canola | nucleus | 33.23 | 58.33 |
| KRH47304 | Soybean | nucleus | 48.66 | 56.55 |
| KRH44591 | Soybean | plastid | 49.26 | 53.04 |
| CDX88560 | Canola | nucleus | 48.37 | 52.75 |
| Bra035137.1-P | Field mustard | nucleus | 48.07 | 52.6 |
| AT1G79700.2 | Thale cress | nucleus | 48.07 | 51.76 |
| KRH63091 | Soybean | plastid | 52.82 | 51.3 |
| KRH55024 | Soybean | plastid | 53.41 | 51.28 |
| VIT_11s0037g00870.t01 | Wine grape | plastid | 52.23 | 50.72 |
| CDX87360 | Canola | nucleus | 47.18 | 50.64 |
| CDY35066 | Canola | nucleus | 49.55 | 50.61 |
| VIT_09s0018g01650.t01 | Wine grape | plastid | 54.01 | 50.42 |
| Bra026082.1-P | Field mustard | nucleus | 49.26 | 50.3 |
| Os08t0442400-01 | Rice | nucleus | 61.13 | 49.16 |
| AT1G16060.1 | Thale cress | nucleus | 50.15 | 48.99 |
| Solyc06g068570.2.1 | Tomato | nucleus | 45.7 | 48.89 |
| TraesCS5B01G220400.2 | Wheat | nucleus | 57.27 | 48.61 |
| Solyc03g117720.2.1 | Tomato | nucleus, plastid | 52.52 | 47.71 |
| Zm00001d032144_P001 | Maize | nucleus | 56.97 | 47.41 |
| KRH72352 | Soybean | nucleus | 51.04 | 47.12 |
| KRH02994 | Soybean | nucleus | 51.34 | 46.76 |
| GSMUA_Achr5P04670_001 | Banana | nucleus | 49.55 | 46.39 |
| Solyc12g010490.1.1 | Tomato | plastid | 49.55 | 45.88 |
| OQU80549 | Sorghum | nucleus | 59.64 | 45.68 |
| PGSC0003DMT400087745 | Potato | nucleus | 37.69 | 43.2 |
| TraesCS4B01G136400.1 | Wheat | plastid | 30.56 | 31.21 |
| TraesCS4B01G180600.1 | Wheat | nucleus | 33.53 | 30.13 |
| TraesCS3B01G368400.1 | Wheat | plastid | 31.75 | 27.79 |
| TraesCS7B01G401400.1 | Wheat | nucleus | 35.01 | 25.27 |
| TraesCS2B01G534000.1 | Wheat | nucleus | 33.23 | 23.19 |
| TraesCS4B01G292900.1 | Wheat | nucleus | 34.42 | 21.97 |
| TraesCS2B01G268100.2 | Wheat | nucleus | 36.5 | 20.5 |
| TraesCS5B01G410200.1 | Wheat | nucleus | 34.72 | 18.63 |
| TraesCS4B01G235900.2 | Wheat | nucleus | 34.12 | 18.2 |
| TraesCS2B01G378100.1 | Wheat | nucleus | 35.01 | 17.88 |
| TraesCS6B01G252000.1 | Wheat | nucleus | 34.42 | 17.52 |
| TraesCS3B01G427300.1 | Wheat | nucleus, plastid | 36.8 | 16.56 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 |
| PANTHER:PTHR32467:SF20 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6B01G153800 | EnsemblPlants:TraesCS6B01G153800.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:157554399..157559854
Molecular Weight (calculated)
37604.7 Da
IEP (calculated)
9.274
GRAVY (calculated)
-0.854
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKQRQSSAG AGNVASDAVR PKSERARRSV TRRRPSQRTS AYRGVTRHRW TGRFEAHPLD KNTWTEPQRK KKGRQVYLGA YGGEEAAARA YDLAASSTCR
101: YRIQLSSYDQ ELKEMEEQSR EEYIGSLRRK STGFSRGVSK YRGVARHHHN GKWEARIGRV FGNKYLYLGT YVTQEEAAMA YDIAAIEHRG LNGVTNFDVS
201: RYIKWHHCCH ADDAGGLNTT LCVNDRLQPS QASPTSHAVS SLGPLLQSPR LKEMMERVAA SQSQSNTNSP SSSSCPPSPP PTTHQHEPRP RNSSTRCSFP
301: DDVQTYFGCD DEEGMSGYAE VDTFLFGDLG VCAELGL
101: YRIQLSSYDQ ELKEMEEQSR EEYIGSLRRK STGFSRGVSK YRGVARHHHN GKWEARIGRV FGNKYLYLGT YVTQEEAAMA YDIAAIEHRG LNGVTNFDVS
201: RYIKWHHCCH ADDAGGLNTT LCVNDRLQPS QASPTSHAVS SLGPLLQSPR LKEMMERVAA SQSQSNTNSP SSSSCPPSPP PTTHQHEPRP RNSSTRCSFP
301: DDVQTYFGCD DEEGMSGYAE VDTFLFGDLG VCAELGL
001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
Arabidopsis Description
ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.