Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G237300.2 | Wheat | nucleus | 96.52 | 96.67 |
| TraesCS4A01G060400.1 | Wheat | nucleus | 94.94 | 95.69 |
| HORVU4Hr1G065990.2 | Barley | nucleus | 91.93 | 91.64 |
| Os03t0232200-01 | Rice | nucleus | 76.27 | 75.08 |
| KXG39831 | Sorghum | nucleus | 70.73 | 72.45 |
| Zm00001d048004_P001 | Maize | nucleus | 69.94 | 67.17 |
| TraesCS2B01G268100.2 | Wheat | nucleus | 48.42 | 51.0 |
| TraesCS5B01G410200.1 | Wheat | nucleus | 44.15 | 44.43 |
| TraesCS4B01G180600.1 | Wheat | nucleus | 25.95 | 43.73 |
| TraesCS7B01G401400.1 | Wheat | nucleus | 29.11 | 39.4 |
| TraesCS4B01G292900.1 | Wheat | nucleus | 32.12 | 38.45 |
| TraesCS2B01G534000.1 | Wheat | nucleus | 28.8 | 37.68 |
| TraesCS6B01G153800.1 | Wheat | nucleus | 18.2 | 34.12 |
| TraesCS5B01G220400.2 | Wheat | nucleus | 21.36 | 34.01 |
| TraesCS4B01G136400.1 | Wheat | plastid | 17.09 | 32.73 |
| TraesCS6B01G252000.1 | Wheat | nucleus | 34.18 | 32.63 |
| TraesCS2B01G378100.1 | Wheat | nucleus | 34.02 | 32.58 |
| TraesCS3B01G427300.1 | Wheat | nucleus, plastid | 34.81 | 29.37 |
| TraesCS3B01G368400.1 | Wheat | plastid | 17.88 | 29.35 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF44 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS4B01G235900 | EnsemblPlants:TraesCS4B01G235900.2 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr4B:+:493527173..493530834
Molecular Weight (calculated)
68112.2 Da
IEP (calculated)
7.094
GRAVY (calculated)
-0.590
Length
632 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAMASGGGN WLGFSLSPHM AMEVPSSEPD HAQAQPASAS AMSASPTNAA TCNLLFSQPA QMAAPPPGYY YVGGAYGDGT STAGVYYSHH SVMPITSDGS
101: LCIMEGMMPS SSPKLEDFLG GGNGSGHDAV TYYSHHQQQQ DQQDQEASRI YQHHQQQLAP YNFQHLTETE AIYQETTAPM DEAMAAAKNL LVTSYGSCYS
201: NAGMQPLSLS MSPRSQSSSC VTAAPQQHQM AAAAAAAAAS MAASQGGSNG GGEQCVGKKR GTGKGGQKQP VHRKSIDTFG QRTSQYRGVT SRHRWTGRYE
301: AHLWDNSCKK DGQTRKGRQV YLGGYDNEDK AARAYDLAAL KYWGPSTNTN FPLENYREEV EEMKSMTRQE FVAHLRRRSS GFSRGASIYR GVTRHHQHGR
401: WQARIGRVAG NKDLYLGTFT TQEEAAEAYD VAAIKFRGLN AVTNFDITRY DVDKIMESSS LLPGDEARKV RPIEAANHVP SMHNGGGELS HAEEGSSGVW
501: RMVLHGTPQQ AAQCTPEVAD LQKGFMDGDP RSSLHGNGIA GFDVESAAHD IDVSGKINYS NSSSLVTSLS NSREGSPERF SLPSLYAKHP NAVSLATMSP
601: WMAMPAPTAT HALRGPNSSI PPMPVFAAWT DA
101: LCIMEGMMPS SSPKLEDFLG GGNGSGHDAV TYYSHHQQQQ DQQDQEASRI YQHHQQQLAP YNFQHLTETE AIYQETTAPM DEAMAAAKNL LVTSYGSCYS
201: NAGMQPLSLS MSPRSQSSSC VTAAPQQHQM AAAAAAAAAS MAASQGGSNG GGEQCVGKKR GTGKGGQKQP VHRKSIDTFG QRTSQYRGVT SRHRWTGRYE
301: AHLWDNSCKK DGQTRKGRQV YLGGYDNEDK AARAYDLAAL KYWGPSTNTN FPLENYREEV EEMKSMTRQE FVAHLRRRSS GFSRGASIYR GVTRHHQHGR
401: WQARIGRVAG NKDLYLGTFT TQEEAAEAYD VAAIKFRGLN AVTNFDITRY DVDKIMESSS LLPGDEARKV RPIEAANHVP SMHNGGGELS HAEEGSSGVW
501: RMVLHGTPQQ AAQCTPEVAD LQKGFMDGDP RSSLHGNGIA GFDVESAAHD IDVSGKINYS NSSSLVTSLS NSREGSPERF SLPSLYAKHP NAVSLATMSP
601: WMAMPAPTAT HALRGPNSSI PPMPVFAAWT DA
001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
Arabidopsis Description
PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.