Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G483200.1 | Wheat | nucleus | 96.79 | 96.38 |
| TraesCS7A01G495800.1 | Wheat | nucleus | 96.79 | 96.38 |
| HORVU7Hr1G111060.4 | Barley | nucleus | 92.93 | 92.93 |
| EER88761 | Sorghum | nucleus | 77.3 | 76.16 |
| Os06t0657500-02 | Rice | nucleus | 75.37 | 75.05 |
| Zm00001d046913_P001 | Maize | nucleus | 76.02 | 73.2 |
| TraesCS2B01G534000.1 | Wheat | nucleus | 47.54 | 45.96 |
| TraesCS4B01G180600.1 | Wheat | nucleus | 35.55 | 44.27 |
| TraesCS4B01G292900.1 | Wheat | nucleus | 42.83 | 37.88 |
| TraesCS6B01G153800.1 | Wheat | nucleus | 25.27 | 35.01 |
| TraesCS5B01G220400.2 | Wheat | nucleus | 29.34 | 34.51 |
| TraesCS4B01G136400.1 | Wheat | plastid | 22.91 | 32.42 |
| TraesCS6B01G252000.1 | Wheat | nucleus | 44.75 | 31.57 |
| TraesCS2B01G378100.1 | Wheat | nucleus | 44.54 | 31.52 |
| TraesCS2B01G268100.2 | Wheat | nucleus | 38.97 | 30.33 |
| TraesCS4B01G235900.2 | Wheat | nucleus | 39.4 | 29.11 |
| TraesCS3B01G368400.1 | Wheat | plastid | 23.98 | 29.09 |
| TraesCS5B01G410200.1 | Wheat | nucleus | 38.97 | 28.98 |
| TraesCS3B01G427300.1 | Wheat | nucleus, plastid | 46.04 | 28.7 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 |
| PANTHER:PTHR32467:SF69 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS7B01G401400 | EnsemblPlants:TraesCS7B01G401400.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:667746875..667749543
Molecular Weight (calculated)
50426.1 Da
IEP (calculated)
6.464
GRAVY (calculated)
-0.574
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDMSSATH PAHHWLSFSL SNNYHHGLLE ALSSSSSGHQ IAGEEAPVDE APKMEDFLGG VGTASTAVVD HGELGSIAAG FLHRYPAHDG TLDQNSGAVT
101: VAAATMEVAE SDQARRPAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ VYLGGYDKEE KAARAYDMAA LKYWGPTTTT NFPVANYEKE
201: LEEMKSMTRQ EFIASLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL NAVTNFDMSR YDVESILNSD
301: LPIGAGAAAR ASKFQPDVLS LPAPNVASPD MLPPAEKDYW SLLAMHYQQQ QQQHLQQQQF PGSAFDAYGS GVNVDFTMGM SGTNNPSGGG ATVWGATGAT
401: GHGGDGSRQS NSYASNIPYT SMLSGSAASA GGGYEGSTGN NGTWVTTSNP AAGTTAPQYY NYLFGME
101: VAAATMEVAE SDQARRPAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ VYLGGYDKEE KAARAYDMAA LKYWGPTTTT NFPVANYEKE
201: LEEMKSMTRQ EFIASLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL NAVTNFDMSR YDVESILNSD
301: LPIGAGAAAR ASKFQPDVLS LPAPNVASPD MLPPAEKDYW SLLAMHYQQQ QQQHLQQQQF PGSAFDAYGS GVNVDFTMGM SGTNNPSGGG ATVWGATGAT
401: GHGGDGSRQS NSYASNIPYT SMLSGSAASA GGGYEGSTGN NGTWVTTSNP AAGTTAPQYY NYLFGME
001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
Arabidopsis Description
PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.