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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • cytosol 1
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0176300-00 Rice mitochondrion 23.21 87.65
TraesCS4A01G060400.1 Wheat nucleus 75.86 77.67
TraesCS4D01G237300.2 Wheat nucleus 75.08 76.39
TraesCS4B01G235900.2 Wheat nucleus 75.08 76.27
KXG39831 Sorghum nucleus 73.05 76.01
HORVU4Hr1G065990.2 Barley nucleus 74.14 75.08
Zm00001d048004_P001 Maize nucleus 71.96 70.21
Os01t0813300-00 Rice nucleus 12.77 64.57
Os07t0124700-01 Rice nucleus 30.84 59.82
Os06t0657500-02 Rice nucleus 29.13 39.87
Os03t0770700-01 Rice plastid 20.87 39.53
Os03t0313100-01 Rice extracellular, nucleus 26.32 39.21
Os04t0653600-01 Rice nucleus 29.59 38.38
Os09t0423800-01 Rice nucleus 20.87 36.71
Os11t0295900-01 Rice nucleus 31.15 35.78
Os06t0145700-00 Rice nucleus 17.6 35.09
Os04t0504500-01 Rice nucleus 34.58 33.74
Os12t0126300-00 Rice nucleus 22.43 32.29
Os01t0899800-01 Rice nucleus 34.74 32.09
Os08t0442400-01 Rice nucleus 20.25 31.03
Os05t0536250-00 Rice nucleus 20.72 30.86
Os02t0614300-01 Rice mitochondrion, nucleus 15.26 30.53
Protein Annotations
MapMan:15.5.7.3Gene3D:3.30.730.10EntrezGene:4332156ProteinID:ABF94801.1EMBL:AK106306InterPro:AP2-like_transcript_factor
InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfProteinID:BAF11380.1ProteinID:BAS83116.1InterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955
EnsemblPlantsGene:Os03g0232200EnsemblPlants:Os03t0232200-01PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR32467
PANTHER:PTHR32467:SF44UniProt:Q10PJ5SMART:SM00380SUPFAM:SSF54171UniParc:UPI0000050DD9RefSeq:XP_015629410.1
SEG:seg:::::
Description
PLETHORA 9Similar to BABY BOOM. (Os03t0232200-01)
Coordinates
chr3:-:6992879..6997181
Molecular Weight (calculated)
68666.1 Da
IEP (calculated)
6.776
GRAVY (calculated)
-0.463
Length
642 amino acids
Sequence
(BLAST)
001: MASGGGSSNW LGFSLSPHMP AMEVPSSSEP STAAHHHHHH HPPAAAAAAG AMSSPPDSAT TCNFLFSPPA AQMVAPSPGY YYVGGAYGDG TSTAGVYYSH
101: LPVMPIKSDG SLCIMEGMMP SSSPKLEDFL GCGNGSGHDP ATYYSQGQEA EDASRAAYQH HQLVPYNYQP LTEAEMLQEA AAAPMEDAMA AAKNFLVTSY
201: GACYGNQEMP QPLSLSMSPG SQSSSCVSAA PQQHQQMAVV AAAAAAGDGQ GSNSNDGGEQ RVGKKRGTGK GGQKQPVHRK SIDTFGQRTS QYRGVTRHRW
301: TGRYEAHLWD NSCKKDGQTR KGRQVYLGGY DTEDKAARAY DLAALKYWGL STHINFPLEN YRDEIEEMER MTRQEYVAHL RRRSSGFSRG ASIYRGVTRH
401: HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DITRYDVDKI MESSSLLPGE AARKVKAIEA APDHVPIGRE LGATEEASAA
501: TVTGTDWRMV LHGSQQQQAA ACTEATADLQ KGFMGDAHSA LHGIVGFDVE SAAADEIDVP GGKISGINFS NSSSLVTSLS NSREGSPERL GLAMLYAKHH
601: PTAVSLAAMN PWMPMPAPAA AHVMRPPSAI AHLPVFAAWT DA
Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)
001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS
Arabidopsis Description
ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.