Factsheet for Os12t0126300-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	27.35	71.76
Os01t0813300-00	Rice	nucleus	20.4	71.65
Zm00001d005016_P005	Maize	plastid	58.97	66.08
TraesCS5D01G150500.1	Wheat	plastid	63.0	65.81
TraesCS5A01G141700.1	Wheat	plastid	62.11	64.72
EES09182	Sorghum	nucleus	60.54	64.29
HORVU5Hr1G045290.10	Barley	nucleus, plastid	61.66	63.07
GSMUA_Achr8P09350_001	Banana	plastid	46.64	57.46
Zm00001d052405_P002	Maize	plastid	53.36	54.71
CDX73488	Canola	nucleus	42.6	46.0
VIT_13s0047g00340.t01	Wine grape	plastid	37.89	45.55
CDX78230	Canola	plastid	42.38	45.54
CDX67595	Canola	plastid	42.38	45.43
GSMUA_Achr3P03630_001	Banana	plastid	42.15	45.41
Bra007066.1-P	Field mustard	plastid	41.93	45.39
Bra003178.1-P	Field mustard	plastid	41.93	45.28
Os09t0423800-01	Rice	nucleus	36.77	44.93
KRH13193	Soybean	nucleus	40.36	43.69
AT3G54320.1	Thale cress	plastid	42.6	43.38
PGSC0003DMT400070735	Potato	nucleus	41.93	43.09
Os06t0145700-00	Rice	nucleus	30.94	42.86
Solyc01g096860.1.1	Tomato	nucleus	42.38	42.66
KRH44733	Soybean	nucleus	40.13	42.02
Os08t0442400-01	Rice	nucleus	35.2	37.47
Os05t0536250-00	Rice	nucleus	34.75	35.96
Os07t0124700-01	Rice	nucleus	24.66	33.23
Os03t0313100-01	Rice	extracellular, nucleus	27.58	28.54
Os06t0657500-02	Rice	nucleus	29.82	28.36
Os04t0653600-01	Rice	nucleus	29.82	26.87
Os11t0295900-01	Rice	nucleus	30.04	23.97
Os02t0614300-01	Rice	mitochondrion, nucleus	16.59	23.05
Os03t0232200-01	Rice	nucleus	32.29	22.43
Os04t0504500-01	Rice	nucleus	31.17	21.12
Os01t0899800-01	Rice	nucleus	30.94	19.86
Os03t0770700-01	Rice	plastid	8.74	11.5

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	EntrezGene:4351386	UniProt:A0A0P0Y6G4	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAT15700.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os12g0126300	EnsemblPlants:Os12t0126300-00
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000393A361	RefSeq:XP_015619972.1	SEG:seg	:	:	:

Description

APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 155Similar to AP2 domain containing protein, expressed. (Os12t0126300-00)

Coordinates

chr12:-:1269804..1274766

Molecular Weight (calculated)

49683.1 Da

IEP (calculated)

4.545

GRAVY (calculated)

-0.830

Length

446 amino acids

Sequence
(BLAST)

001: MAKRSSPDPA SSSPSASSSP SSPSSSSSED SSSPMSMPCK RRARPRTEKS TGKAKRPKKE SKEVADPSSN GGGGGKRSSI YRGVTRHRWT GRFEAHLWDK
101: NCSTSLQNKK KGRQVYLGAY DSEEAAARAY DLAALKYWGP ETVLNFPLEE YEKERSEMEG VSREEYLASL RRRSSGFSRG VSKYRGVARH HHNGRWEARI
201: GRVLGNKYLY LGTFDTQEEA AKAYDLAAIE YRGANAVTNF DISCYLDQPQ LLAQLQQEPQ LLAQLQQEPQ VVPALHEEPQ DDDRSENAVQ ELSSSEANTS
301: SDNNEPLAAD DSAECMNEPL PIVDGIEESL WSPCLDYELD TMPGAYFSNS MNFSEWFNDE AFEGGMEYLF EGCSSITEGG NSMDNSGMAE YNLFEECNML
401: EKDISDFLDK DISDFLDKDI SISDRERISP QANNISCPQK MISVCN

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.