CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44733	Soybean	nucleus	94.42	91.31
Os01t0813300-00	Rice	nucleus	23.54	76.38
KRH47304	Soybean	nucleus	37.86	53.79
KRH44591	Soybean	plastid	38.11	50.16
GSMUA_Achr8P09350_001	Banana	plastid	41.5	47.24
KRH63091	Soybean	plastid	39.56	46.97
VIT_13s0047g00340.t01	Wine grape	plastid	42.23	46.9
CDX78230	Canola	plastid	46.36	46.02
CDX67595	Canola	plastid	46.36	45.91
Bra003178.1-P	Field mustard	plastid	45.87	45.76
CDX73488	Canola	nucleus	45.87	45.76
Bra007066.1-P	Field mustard	plastid	45.63	45.63
KRH55024	Soybean	plastid	38.59	45.3
Zm00001d005016_P005	Maize	plastid	43.2	44.72
AT3G54320.1	Thale cress	plastid	47.33	44.52
KRH72352	Soybean	nucleus	38.35	43.29
EES09182	Sorghum	nucleus	43.69	42.86
KRH02994	Soybean	nucleus	38.35	42.7
Solyc01g096860.1.1	Tomato	nucleus	45.39	42.21
PGSC0003DMT400070735	Potato	nucleus	44.17	41.94
TraesCS5D01G150500.1	Wheat	plastid	43.45	41.92
TraesCS5A01G141700.1	Wheat	plastid	43.2	41.59
GSMUA_Achr3P03630_001	Banana	plastid	41.75	41.55
HORVU5Hr1G045290.10	Barley	nucleus, plastid	42.96	40.6
Os12t0126300-00	Rice	nucleus	43.69	40.36
GSMUA_Achr3P09410_001	Banana	nucleus	34.47	39.66
KRH01131	Soybean	nucleus	36.65	38.52
KRH40131	Soybean	nucleus	36.65	38.52
TraesCS4B01G136400.1	Wheat	plastid	30.58	38.18
Zm00001d052405_P002	Maize	plastid	38.35	36.32
KRG99157	Soybean	nucleus	35.68	36.21
KRH45852	Soybean	nucleus	35.68	36.12
KXG33588	Sorghum	plastid	34.71	35.84
TraesCS4D01G131200.1	Wheat	plastid	30.34	35.21
TraesCS4A01G181300.1	Wheat	plastid	30.34	34.63
TraesCS3B01G368400.1	Wheat	plastid	32.28	34.55
TraesCS3D01G330400.1	Wheat	plastid	31.07	33.95
Zm00001d043116_P002	Maize	nucleus	34.22	30.52
KRG99477	Soybean	nucleus	31.55	29.61
KRH45549	Soybean	nucleus	32.04	29.53
KRH19032	Soybean	nucleus	33.74	26.33
KRH74476	Soybean	nucleus	32.28	26.08
KRH39470	Soybean	nucleus	31.8	25.59
KRH24688	Soybean	nucleus	33.74	25.14
KRH02858	Soybean	nucleus	33.74	24.09
KRH34229	Soybean	nucleus	32.77	23.48
KRH29690	Soybean	nucleus	33.5	23.08
KRH28322	Soybean	nucleus	33.98	22.88
KRH06179	Soybean	nucleus	31.8	22.82
KRH77164	Soybean	nucleus	33.98	22.76
KRH47597	Soybean	nucleus	31.8	22.63
KRH15454	Soybean	nucleus	32.52	22.37
KRG88628	Soybean	nucleus	26.21	22.27
KRH58159	Soybean	nucleus	34.71	21.5
KRH61449	Soybean	nucleus	33.98	21.12
KRH52140	Soybean	nucleus	33.74	21.06
KRH04380	Soybean	nucleus	34.22	20.61
KRH40267	Soybean	nucleus	35.19	20.51
KRH00957	Soybean	nucleus	31.8	18.48

Protein Annotations

EntrezGene:100527432	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02009670	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ncoils:Coil	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_15G221600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	UniProt:I1MIG7	InterPro:IPR001471	InterPro:IPR036955
EMBL:JX515339	EnsemblPlants:KRH13193	ProteinID:KRH13193	ProteinID:KRH13193.1	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR32467	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000152A183	SEG:seg

Description

hypothetical protein

Coordinates

chr15:+:40067763..40073180

Molecular Weight (calculated)

46505.7 Da

IEP (calculated)

5.816

GRAVY (calculated)

-0.849

Length

412 amino acids

Sequence
(BLAST)

001: MKRSPASSCS SSTSSVGFEA PIEKRRPKHP RRNNLKSQKC KQNQTTTGGR RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI QSKKGRQVYL GAYDTEESAA
101: RTYDLAALKY WGKDATLNFP IETYTKELEE MDKVSREEYL ASLRRQSSGF SRGLSKYRGV ARHHHNGRWE ARIGRVCGNK YLYLGTYKTQ EEAAVAYDMA
201: AIEYRGVNAV TNFDISNYMD KIKKKNDQTQ QQQTEAQTET VPNSSDSEEV EVEQQTTTIT TPPPSENLHM PPQQHQVQYT PHVSPREEES SSLITIMDHV
301: LEQDLPWSFM YTGLSQFQDP NLAFCKGDDD LVGMFDSAGF EEDIDFLFST QPGDETESDV NNMSAVLDSV ECGDTNGAGG SMMHVDNKQK IVSFASSPSS
401: TTTVSCDYAL DL

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.