Factsheet for TraesCS4A01G181300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G131200.1	Wheat	plastid	93.35	94.93
TraesCS4B01G136400.1	Wheat	plastid	86.43	94.55
Os01t0813300-00	Rice	nucleus	24.38	69.29
KXG33588	Sorghum	plastid	51.52	46.62
Zm00001d043116_P002	Maize	nucleus	50.97	39.83
GSMUA_Achr3P09410_001	Banana	nucleus	35.18	35.47
TraesCS5A01G221600.1	Wheat	nucleus	34.9	31.82
Bra007066.1-P	Field mustard	plastid	36.01	31.55
CDX73488	Canola	nucleus	36.01	31.48
CDX78230	Canola	plastid	36.01	31.33
VIT_13s0047g00340.t01	Wine grape	plastid	31.86	31.0
TraesCS5A01G141700.1	Wheat	plastid	36.57	30.84
KRH13193	Soybean	nucleus	34.63	30.34
Bra003178.1-P	Field mustard	plastid	34.35	30.02
AT3G54320.1	Thale cress	plastid	36.29	29.91
CDX67595	Canola	plastid	34.35	29.81
PGSC0003DMT400070735	Potato	nucleus	35.18	29.26
TraesCS1A01G357800.1	Wheat	nucleus	33.24	29.06
KRH44733	Soybean	nucleus	34.07	28.87
TraesCS7A01G095100.1	Wheat	nucleus	32.41	28.68
Solyc01g096860.1.1	Tomato	nucleus	35.18	28.67
TraesCS4A01G395400.1	Wheat	nucleus	32.41	28.61
TraesCS6A01G125700.1	Wheat	nucleus	26.59	27.51
TraesCS4A01G123800.1	Wheat	nucleus	28.25	26.98
TraesCS7A01G495800.1	Wheat	nucleus	29.36	22.6
TraesCS2A01G505600.1	Wheat	nucleus	28.81	21.76
TraesCS4A01G011600.1	Wheat	nucleus	29.92	20.45
TraesCS2A01G267600.2	Wheat	nucleus	30.75	18.47
TraesCS5A01G405400.1	Wheat	nucleus	31.02	17.81
TraesCS6A01G229500.1	Wheat	nucleus	31.58	17.3
TraesCS4A01G060400.1	Wheat	nucleus	29.64	17.07
TraesCS3A01G395500.1	Wheat	nucleus	31.86	16.38

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS4A01G181300	EnsemblPlants:TraesCS4A01G181300.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:456290064..456292784

Molecular Weight (calculated)

39821.8 Da

IEP (calculated)

7.064

GRAVY (calculated)

-0.491

Length

361 amino acids

Sequence
(BLAST)

001: MTNKKPTWSS SASACSGGSR IGLPCAVANQ KKKKRARSDA VVVPARGSSV YRGVSRHCAS GKYEVHLWDR HYRSTAENRR GRQGAYDTEE AAARTYDLAA
101: LKYWGAQCGG LLLNFPVDTY KDELERMQRV TREEYVAILR RDSSGFTRGA SKYRGVAKHH KKGRWEARIG CGSGSGSGGG KRYLYLGIFS VFSIVLSLQV
201: RSTSSTFLWL ISRNGTLNLH AVTQEEAARA YDLAAIQLRG LAAVTNFDVD SYYVDQQLQP PLCKVDPDPE PAGQLLLPKV EPKEEEPEPG PVLRDDVDDV
301: DCAIAEVLQA LCMDRADFEA RYPPRGAPGW WPSDDDLREL PADVGFEDDI ESVLFDAPPA A

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.