Factsheet for TraesCS5A01G141700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G150500.1	Wheat	plastid	95.09	95.32
HORVU5Hr1G045290.10	Barley	nucleus, plastid	91.59	89.91
Os12t0126300-00	Rice	nucleus	64.72	62.11
Zm00001d005016_P005	Maize	plastid	57.48	61.81
EES09182	Sorghum	nucleus	58.64	59.76
GSMUA_Achr8P09350_001	Banana	plastid	45.56	53.87
Zm00001d052405_P002	Maize	plastid	51.4	50.57
CDX73488	Canola	nucleus	42.76	44.31
GSMUA_Achr3P03630_001	Banana	plastid	42.29	43.72
CDX78230	Canola	plastid	42.06	43.37
CDX67595	Canola	plastid	42.06	43.27
Bra007066.1-P	Field mustard	plastid	41.59	43.2
KRH13193	Soybean	nucleus	41.59	43.2
Bra003178.1-P	Field mustard	plastid	41.59	43.1
VIT_13s0047g00340.t01	Wine grape	plastid	36.92	42.59
PGSC0003DMT400070735	Potato	nucleus	42.52	41.94
KRH44733	Soybean	nucleus	41.59	41.78
AT3G54320.1	Thale cress	plastid	42.76	41.78
Solyc01g096860.1.1	Tomato	nucleus	43.22	41.76
TraesCS5A01G221600.1	Wheat	nucleus	36.68	39.65
TraesCS6A01G125700.1	Wheat	nucleus	30.14	36.96
TraesCS4A01G181300.1	Wheat	plastid	30.84	36.57
TraesCS7A01G095100.1	Wheat	nucleus	33.88	35.54
TraesCS4A01G395400.1	Wheat	nucleus	33.88	35.45
TraesCS1A01G357800.1	Wheat	nucleus	33.88	35.11
TraesCS4A01G123800.1	Wheat	nucleus	28.97	32.8
TraesCS7A01G495800.1	Wheat	nucleus	30.84	28.14
TraesCS2A01G505600.1	Wheat	nucleus	29.91	26.78
TraesCS4A01G011600.1	Wheat	nucleus	29.91	24.24
TraesCS2A01G267600.2	Wheat	nucleus	32.48	23.13
TraesCS4A01G060400.1	Wheat	nucleus	31.31	21.37
TraesCS5A01G405400.1	Wheat	nucleus	30.84	20.99
TraesCS6A01G229500.1	Wheat	nucleus	32.24	20.94
TraesCS3A01G395500.1	Wheat	nucleus	31.78	19.37

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS5A01G141700	EnsemblPlants:TraesCS5A01G141700.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr5A:+:314663922..314668122

Molecular Weight (calculated)

46953.2 Da

IEP (calculated)

5.715

GRAVY (calculated)

-0.758

Length

428 amino acids

Sequence
(BLAST)

001: MKRSPPPPPP QPSPSSSPAC SLSPSPSSPS SSDSSSIAIP RKRARTQKAG SAKAKAAPKR AKKDASRSSK ESDASANGAA AAGKRSSIYR GVTRHRWTGR
101: FEAHLWDKNC FTSIQNKKKG RQVYLGAYDT EEAAARAYDL AALKYWGPET TLNFTVDEYA KERSEMEGVS REEYLAALRR RSSGFSRGVS KYRGVARHHH
201: NGRWEARIGR VLGNKYLYLG TFDTQEEAAR AYDLAAIEYR GANAVTNFDI SRYLDQPQLL TQLEQGPQVV PALQEELQHD HQSDNAVQEL NSGEAQKPGS
301: VNEPIAVDDT DNTGDMGAPL VFDSGVEENL WSPCYELENF FGPNNSNSMN LSEYFNVNDA TFESNIGYLF EGCPDIDDCS TRHGTGLAAL GFLKEGDDNM
401: KDVPDMDAEL TPQANDVSCP PKMITVCN

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.