Factsheet for GSMUA_Achr3P03630_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P09350_001	Banana	plastid	45.41	51.93
Zm00001d005016_P005	Maize	plastid	43.48	45.23
VIT_13s0047g00340.t01	Wine grape	plastid	39.61	44.2
EES09182	Sorghum	nucleus	44.69	44.05
GSMUA_Achr5P04670_001	Banana	nucleus	38.16	43.89
TraesCS5D01G150500.1	Wheat	plastid	44.44	43.09
TraesCS5A01G141700.1	Wheat	plastid	43.72	42.29
GSMUA_Achr3P09410_001	Banana	nucleus	36.47	42.18
Os12t0126300-00	Rice	nucleus	45.41	42.15
CDX73488	Canola	nucleus	41.79	41.89
KRH13193	Soybean	nucleus	41.55	41.75
CDX78230	Canola	plastid	41.79	41.69
Bra007066.1-P	Field mustard	plastid	41.3	41.5
CDX67595	Canola	plastid	41.55	41.35
HORVU5Hr1G045290.10	Barley	nucleus, plastid	43.48	41.28
Bra003178.1-P	Field mustard	plastid	41.06	41.16
KRH44733	Soybean	nucleus	41.06	39.91
Solyc01g096860.1.1	Tomato	nucleus	41.79	39.05
AT3G54320.1	Thale cress	plastid	41.3	39.04
PGSC0003DMT400070735	Potato	nucleus	40.34	38.48
GSMUA_Achr1P24940_001	Banana	nucleus	31.16	38.28
Zm00001d052405_P002	Maize	plastid	39.13	37.24
GSMUA_Achr8P26510_001	Banana	nucleus	28.99	35.5
GSMUA_AchrUn_...	Banana	nucleus	31.16	32.58
GSMUA_Achr3P32510_001	Banana	nucleus	32.13	31.44
GSMUA_Achr4P32280_001	Banana	nucleus	31.4	30.73
GSMUA_Achr9P13660_001	Banana	nucleus	30.19	28.67
GSMUA_Achr3P05070_001	Banana	nucleus	31.16	28.35
GSMUA_AchrUn_...	Banana	nucleus	31.16	27.51
GSMUA_Achr5P25620_001	Banana	nucleus	31.88	24.26
GSMUA_Achr1P21950_001	Banana	nucleus	32.85	24.16
GSMUA_Achr7P00740_001	Banana	nucleus	31.4	24.03
GSMUA_Achr3P15150_001	Banana	nucleus	31.88	23.96
GSMUA_Achr8P09110_001	Banana	nucleus	34.06	23.74
GSMUA_Achr2P05880_001	Banana	nucleus	32.37	23.43
GSMUA_Achr1P12410_001	Banana	nucleus	31.16	23.41
GSMUA_Achr3P30690_001	Banana	nucleus	32.61	23.16
GSMUA_Achr11P...	Banana	nucleus	30.68	23.01
GSMUA_Achr3P21460_001	Banana	nucleus	32.85	22.22
GSMUA_Achr7P27500_001	Banana	nucleus	32.37	21.75
GSMUA_Achr9P07890_001	Banana	nucleus	32.61	21.63
GSMUA_Achr6P28550_001	Banana	nucleus	31.4	20.34

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G03630_001
EnsemblPlants:GSMUA_Achr3P03630_001	EnsemblPlants:GSMUA_Achr3T03630_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SBI1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF20	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002954739	SEG:seg	:	:	:	:

Description

Putative Ethylene-responsive transcription factor WRI1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03630_001]

Coordinates

chr3:+:2354360..2357482

Molecular Weight (calculated)

46079.0 Da

IEP (calculated)

8.434

GRAVY (calculated)

-0.585

Length

414 amino acids

Sequence
(BLAST)

001: MVSLPSPTSP SLYIYIYTSG PPLRRAKPIT PLLQRFAPPI PMKSASLSLP LSPSTSSSSS NSCTLSSSSA FQVSKPRKPR RAKKGANPDK KRLGNGKRSS
101: AFRGVTRHRW TGRYEAHLWD KHCWNPIQNK KGRQVYLGAY DDEEAAARAY DLAALKYWGP DSALNFPFVT YTKEYEEMQN MSKEEYLASL RRRSNGFSRG
201: VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTFGTEEEA AQAYDLAAIE YRGPNAVTNF DISCYVKFPQ PLLQPHPIPQ PLQMPKARPP AQEQQPSATC
301: EEERRQAVEL PSYVDHTAAA AADGVDAIPW SPFMDQCFDD VYADHCVGLH RTGDLHSIFG SVGFDDNVDI LFDASESSSR VEEGDGDAAK DCIFEDSAAT
401: VSNLVGVRLS QLLQ

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.