Factsheet for GSMUA_Achr11P11660_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P24940_001	Banana	nucleus	42.75	70.03
PGSC0003DMT400041758	Potato	nucleus	25.36	53.64
GSMUA_Achr8P26510_001	Banana	nucleus	27.9	45.56
TraesCS4D01G182100.1	Wheat	nucleus	29.89	43.88
TraesCS4B01G180600.1	Wheat	nucleus	29.71	43.73
HORVU4Hr1G052880.2	Barley	nucleus	16.85	43.66
TraesCS4A01G123800.1	Wheat	nucleus	29.53	43.12
GSMUA_AchrUn_...	Banana	nucleus	30.62	42.68
CDX97022	Canola	nucleus	31.16	42.05
CDX78387	Canola	nucleus	30.25	41.54
Os03t0313100-01	Rice	extracellular, nucleus	30.98	39.68
KRG99477	Soybean	nucleus	31.34	39.41
KXG39508	Sorghum	extracellular, nucleus	30.07	38.88
Bra024394.1-P	Field mustard	nucleus	31.34	38.53
CDY14577	Canola	nucleus	31.52	38.33
GSMUA_Achr9P13660_001	Banana	nucleus	30.25	38.3
KRH45549	Soybean	nucleus	30.98	38.26
VIT_00s0772g00020.t01	Wine grape	nucleus	31.7	38.21
Zm00001d028919_P001	Maize	extracellular, nucleus	28.99	37.65
GSMUA_Achr4P32280_001	Banana	nucleus	28.62	37.35
GSMUA_Achr3P05070_001	Banana	nucleus	30.62	37.14
GSMUA_AchrUn_...	Banana	nucleus	30.98	36.46
KRH74476	Soybean	nucleus	32.79	35.49
KRH39470	Soybean	nucleus	32.79	35.35
VIT_00s1291g00010.t01	Wine grape	nucleus	32.61	35.09
AT5G65510.2	Thale cress	nucleus	31.52	34.94
Solyc05g051380.2.1	Tomato	nucleus	31.52	34.73
CDY08784	Canola	nucleus	31.7	34.25
Solyc11g010710.1.1	Tomato	nucleus	32.97	33.52
GSMUA_Achr8P09350_001	Banana	plastid	21.92	33.43
GSMUA_Achr5P25620_001	Banana	nucleus	32.25	32.72
GSMUA_Achr5P04670_001	Banana	nucleus	21.2	32.5
GSMUA_Achr3P09410_001	Banana	nucleus	20.65	31.84
CDX69826	Canola	nucleus	32.07	31.61
Bra006065.1-P	Field mustard	nucleus	31.52	31.3
CDY40102	Canola	nucleus	31.52	31.24
Bra028584.1-P	Field mustard	nucleus	31.7	31.08
GSMUA_Achr3P03630_001	Banana	plastid	23.01	30.68
Bra009026.1-P	Field mustard	nucleus	31.88	30.66
GSMUA_Achr8P09110_001	Banana	nucleus	32.61	30.3
GSMUA_Achr2P05880_001	Banana	nucleus	31.34	30.24
GSMUA_Achr7P00740_001	Banana	nucleus	29.53	30.13
GSMUA_Achr1P21950_001	Banana	nucleus	30.62	30.02
CDX85757	Canola	nucleus	31.34	29.88
GSMUA_Achr3P21460_001	Banana	nucleus	32.97	29.74
GSMUA_Achr3P15150_001	Banana	nucleus	29.53	29.58
AT5G10510.3	Thale cress	nucleus	32.25	29.47
GSMUA_Achr9P07890_001	Banana	nucleus	32.97	29.17
GSMUA_Achr1P12410_001	Banana	nucleus	28.26	28.31
GSMUA_Achr6P28550_001	Banana	nucleus	32.43	28.01
GSMUA_Achr3P30690_001	Banana	nucleus	29.53	27.96
PGSC0003DMT400037835	Potato	nucleus	26.09	27.59
GSMUA_Achr7P27500_001	Banana	nucleus	29.53	26.46
GSMUA_Achr3P32510_001	Banana	nucleus	19.93	26.0

Protein Annotations

KEGG:00906+5.2.1.14	MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	InterPro:DUF4033	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G11660_001	EnsemblPlants:GSMUA_Achr11P11660_001	EnsemblPlants:GSMUA_Achr11T11660_001	InterPro:IPR001471	InterPro:IPR036955
UniProt:M0RRE6	PFAM:PF00847	PFAM:PF13225	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002954FDD	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G11660_001]

Coordinates

chr11:+:10362732..10372449

Molecular Weight (calculated)

61445.3 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.342

Length

552 amino acids

Sequence
(BLAST)

001: MEMLLRPCGF DLQASSDNDC AVAYNYQYFL PPPPAPASTE LKLEDLLGGD SGAHCSETLT VDGQDTSSVS TVLIQDLRAV DDSSSAPSTG LENTLVPPPQ
101: PPAAGHRTSV YRGVTRHRWT GRYEAHLWDN TCKREGQKRK GRQVYLGGYD REEKAARAYD LAALKYWGPT ATTNFPVICY SREIEEMKCM TKQEFIASIR
201: RKSSGFSRGA SIYRGVTRQE IQFFENIIRF SLMHHQHGRW QARIGRVAGN KDLYLGTFAT EEEAAEAYDV AAIKFRGANA VTNFELSRYD VEAIANTELP
301: IGASAKRIKQ SLQSDQDQLP LDKSDKGQHL NFIDMPRSEY KPGAFDALLL QFFRKKMVQE VGWDSEKPGY VGLIEVANHL MIKGKSISET ERSAVRVLVS
401: LFPPLLLDLF KMLIAPINGG KVASMMLARA TAMLCQWLMG PCSVNSVDLA DGSSCSSGVF VERCKYLEES KCLGVCVNTC KLPTQTFFRD YMGVPLYMEP
501: NFSDYSCQFN FGVPPPPPAS DKALQEPCLA ICPNASRRRE LSGREIEQCP KV

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.