Factsheet for PGSC0003DMT400041758

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G052880.2	Barley	nucleus	38.31	46.95
Solyc11g010710.1.1	Tomato	nucleus	95.79	46.04
PGSC0003DMT400055210	Potato	nucleus	46.36	42.31
VIT_00s0772g00020.t01	Wine grape	nucleus	73.18	41.7
PGSC0003DMT400035807	Potato	nucleus	50.19	40.43
GSMUA_Achr1P24940_001	Banana	nucleus	51.72	40.06
KRH74476	Soybean	nucleus	78.16	40.0
KRH39470	Soybean	nucleus	78.16	39.84
VIT_00s1291g00010.t01	Wine grape	nucleus	73.95	37.62
TraesCS4D01G182100.1	Wheat	nucleus	50.57	35.11
TraesCS4B01G180600.1	Wheat	nucleus	50.19	34.93
TraesCS4A01G123800.1	Wheat	nucleus	49.81	34.39
PGSC0003DMT400087745	Potato	nucleus	36.78	32.65
Os03t0313100-01	Rice	extracellular, nucleus	50.57	30.63
KXG39508	Sorghum	extracellular, nucleus	49.04	29.98
PGSC0003DMT400037835	Potato	nucleus	58.24	29.12
Zm00001d028919_P001	Maize	extracellular, nucleus	45.98	28.24
PGSC0003DMT400041881	Potato	nucleus	55.17	28.12
GSMUA_Achr11P...	Banana	nucleus	53.64	25.36
PGSC0003DMT400035354	Potato	nucleus	52.49	24.86
PGSC0003DMT400006170	Potato	nucleus	37.93	24.38
PGSC0003DMT400070735	Potato	nucleus	37.16	22.35
PGSC0003DMT400012588	Potato	nucleus	49.43	19.75

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	UniProt:M1BBX7	PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400016196	PGSC:PGSC0003DMG400016196	EnsemblPlants:PGSC0003DMT400041758
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF33	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000296B9D7	SEG:seg	:	:	:	:

Description

AP2 domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400016196]

Coordinates

chr11:-:2203013..2204624

Molecular Weight (calculated)

28957.0 Da

IEP (calculated)

8.921

GRAVY (calculated)

-0.471

Length

261 amino acids

Sequence
(BLAST)

001: MAGSRFLAII QSTVYLGGYD KEDKAARAYD LAALKYWGPT ATTNFPVTNY TKELEEMKHM TKQEFIASLR RKSSGFSRGA SIYRGVTRHH QQGRWQARIG
101: RVAGNKDLYL GTFATEEEAA EAYDIAAIKF RGVNAVTNFE MNRYDVEAIM QSSLPVGGTA KRLKLSLESE QKSSSSNNNH QQQQQLTQCN STNNINFGAM
201: PPVSAIPCGV PFDNTTPAFY HHNFFQYLHP GNASVPDASN AAAMPLLPSA ADLFIWPHQS Y

Best Arabidopsis Sequence Match ( AT5G65510.1 )
(BLAST)

001: MAPPMTNCLT FSLSPMEMLK STDQSHFSSS YDDSSTPYLI DNFYAFKEEA EIEAAAASMA DSTTLSTFFD HSQTQIPKLE DFLGDSFVRY SDNQTETQDS
101: SSLTPFYDPR HRTVAEGVTG FFSDHHQPDF KTINSGPEIF DDSTTSNIGG THLSSHVVES STTAKLGFNG DCTTTGGVLS LGVNNTSDQP LSCNNGERGG
201: NSNKKKTVSK KETSDDSKKK IVETLGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQAR KGRQVYLGGY DKEDRAARAY DLAALKYWGS TATTNFPVSS
301: YSKELEEMNH MTKQEFIASL RRKSSGFSRG ASIYRGVTRH HQQGRWQARI GRVAGNKDLY LGTFATEEEA AEAYDIAAIK FRGINAVTNF EMNRYDIEAV
401: MNSSLPVGGA AAKRHKLKLA LESPSSSSSD HNLQQQQLLP SSSPSDQNPN SIPCGIPFEP SVLYYHQNFF QHYPLVSDST IQAPMNQAEF FLWPNQSY

Arabidopsis Description

AIL7AP2-like ethylene-responsive transcription factor AIL7 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9N8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.