Factsheet for PGSC0003DMT400012588

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g077490.2.1	Tomato	nucleus	95.56	95.71
PGSC0003DMT400055210	Potato	nucleus	29.25	66.78
GSMUA_Achr8P26510_001	Banana	nucleus	33.84	65.38
Os07t0124700-01	Rice	nucleus	29.86	58.91
GSMUA_Achr3P30690_001	Banana	nucleus	52.37	58.66
GSMUA_Achr3P15150_001	Banana	nucleus	48.09	56.99
GSMUA_Achr7P27500_001	Banana	nucleus	52.53	55.68
TraesCS2B01G268100.2	Wheat	nucleus	47.93	52.17
TraesCS2A01G267600.2	Wheat	nucleus	47.93	52.08
TraesCS2D01G256600.2	Wheat	nucleus	47.78	52.0
Zm00001d018731_P001	Maize	nucleus	47.47	50.57
Zm00001d007840_P001	Maize	nucleus	45.94	50.0
PGSC0003DMT400041758	Potato	nucleus	19.75	49.43
TraesCS5A01G405400.1	Wheat	nucleus	46.71	48.49
TraesCS5D01G415500.1	Wheat	nucleus	46.09	48.08
TraesCS5B01G410200.1	Wheat	nucleus	46.09	47.93
HORVU5Hr1G098450.2	Barley	nucleus	44.87	46.43
EER93382	Sorghum	nucleus	45.94	46.3
KXG34322	Sorghum	nucleus	48.24	46.26
Zm00001d034204_P001	Maize	nucleus	47.17	46.04
PGSC0003DMT400035807	Potato	nucleus	20.06	40.43
PGSC0003DMT400041881	Potato	nucleus	31.09	39.65
PGSC0003DMT400035354	Potato	nucleus	31.24	37.02
PGSC0003DMT400087745	Potato	nucleus	15.47	34.35
PGSC0003DMT400006170	Potato	nucleus	20.37	32.76
PGSC0003DMT400070735	Potato	nucleus	21.29	32.03
PGSC0003DMT400037835	Potato	nucleus	23.58	29.5

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	UniProt:M1A1H2	PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400004921	PGSC:PGSC0003DMG400004921	EnsemblPlants:PGSC0003DMT400012588
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002953490	SEG:seg	:	:	:	:

Description

ANT [Source:PGSC_GENE;Acc:PGSC0003DMG400004921]

Coordinates

chr4:-:66588307..66592231

Molecular Weight (calculated)

71924.6 Da

IEP (calculated)

7.474

GRAVY (calculated)

-0.692

Length

653 amino acids

Sequence
(BLAST)

001: MKAMNDDSRS NNNNNHNSAA ANSNWLGFSL SPHMKMEVTN SSETQHQHQF AQSFYLSSSP PPPMNVSTTS ALCYENNPFH SSLSVMPLKS DGSLCIMEAL
101: SRSHADAMVQ SSSPKLEDFL GGASMGNSQY GSHDREAMAL SLDSMYYHQN EEEIQVHSHH PYYSPMHCHG MYHQESLLEE TKPTQISNSD AQMTGNELKS
201: WGHYAEQHAI DQHINATCSM VAAAAAAAGG GGGTSGCNDL QSLSLSMNPG SQSSCVTPRQ ISPTGLECVA VESKKRASGK VAQKQPVHRK SIDTFGQRTS
301: QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR KGRQVYLGGY DMEEKAARAY DQAALKYWGP STHINFPLEN YQKELDDMKN MTRQEYVAHL RRKSSGFSRG
401: ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDVAAIK FRGVNAVTNF DISRYDVEKI MASNTLPAGE LARRTKEREP IEYNNNNNNN
501: NIGGVGGHKN EECVDNNNNG NITDWKMVLY QTSNPSLGLN YRNPTSFSMA LQDLIGIDSM TNSNNHHATI LDHEQNKIGN HFSNASSLVT SLGSSREPSP
601: DKSATAASLV FAKPTKFAVP TATSVNACIP SAQLRPIPVS MAHLPVFAAL NDA

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.