Factsheet for HORVU5Hr1G098450.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G415500.1	Wheat	nucleus	89.54	90.26
TraesCS5B01G410200.1	Wheat	nucleus	88.91	89.33
TraesCS5A01G405400.1	Wheat	nucleus	88.43	88.71
EER93382	Sorghum	nucleus	63.71	62.04
Zm00001d034204_P001	Maize	nucleus	65.13	61.44
GSMUA_Achr4P32280_001	Banana	nucleus	38.83	57.92
PGSC0003DMT400055210	Potato	nucleus	24.72	54.55
CDX72655	Canola	endoplasmic reticulum, golgi	28.68	54.19
GSMUA_Achr7P00740_001	Banana	nucleus	43.9	51.2
KRG88628	Soybean	nucleus	35.66	46.39
CDX75673	Canola	nucleus	39.94	45.99
Bra011782.1-P	Field mustard	nucleus	39.14	45.32
AT4G37750.1	Thale cress	nucleus	39.78	45.23
Solyc02g092050.2.1	Tomato	nucleus	46.28	45.2
VIT_18s0001g08610.t01	Wine grape	nucleus	48.02	44.96
Solyc04g077490.2.1	Tomato	nucleus	46.43	44.94
PGSC0003DMT400012588	Potato	nucleus	46.43	44.87
CDX69324	Canola	nucleus	39.46	44.86
VIT_07s0151g00440.t01	Wine grape	nucleus	47.54	44.25
KRH15454	Soybean	nucleus	41.52	43.74
Bra017852.1-P	Field mustard	nucleus	38.51	43.7
CDY44027	Canola	nucleus	38.51	43.47
KRH28322	Soybean	nucleus	42.16	43.46
CDY50260	Canola	nucleus	38.51	43.39
KRH61449	Soybean	nucleus	45.32	43.14
Bra010610.1-P	Field mustard	nucleus	37.56	42.86
KRH58159	Soybean	nucleus	45.01	42.71
KRH52140	Soybean	nucleus	44.53	42.58
KRH77164	Soybean	nucleus	41.36	42.44
HORVU4Hr1G065990.2	Barley	nucleus	42.63	42.43
HORVU4Hr1G052880.2	Barley	nucleus	14.26	42.25
KRH04380	Soybean	nucleus	45.48	41.96
HORVU7Hr1G111060.4	Barley	nucleus	27.89	37.69
CDY71263	Canola	nucleus	18.23	35.28
HORVU4Hr1G076200.4	Barley	nucleus	29.79	34.12
HORVU1Hr1G080350.3	Barley	nucleus	20.92	32.59
HORVU2Hr1G087310.1	Barley	nucleus	33.91	32.47
HORVU6Hr1G057060.3	Barley	nucleus	32.96	31.9
HORVU3Hr1G089160.2	Barley	nucleus	31.38	30.0
HORVU5Hr1G045290.10	Barley	nucleus, plastid	20.13	29.13

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G098450
EnsemblPlants:HORVU5Hr1G098450.2	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0XVI1	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	SignalP:SignalP-noTM
UniParc:UPI0002967835	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:607811609..607815014

Molecular Weight (calculated)

66074.0 Da

IEP (calculated)

7.480

GRAVY (calculated)

-0.361

Length

631 amino acids

Sequence
(BLAST)

001: MTNGGHSMSG AGGWLGFSLS PQVAAAAMDA AAGSGIVDVA GHHHAHHGGV YYHPDPVASS PMSFYFGGGD NVGAASGGYY SGISALPLRS DGSLCLADAL
101: RRSEQKHHGA EVSAPPKLED FLGAGPAMAL SLDNSGYYYG GHSHDNDGAG GGQQPLLYAM MPGSGGHHMY YDAHAALLDE QAAATSAAME AAGWMARDGD
201: VYDVDAGNGE EGGGAIVPAG PGNPGGYAHP LTLSISSGSQ SSCVTVQQAA AQAHAYVGQA TAASKKRGAG AGAKQNKQPV VHRKCIDTFG QRTSKYRGVT
301: RHRWTGRYEA HLWDNSCRKE GQTRKGRQVY LGGYDMEEKA GRAYDLAALK YWGASTHINF PVEDYQEELE VMKNMTRLEY VAHIRRKSSG FSRGASMYRG
401: VTRHHQQGRW QARIGRVSGN KDLYLGTFSA EADAAEAYDV AAIKFRGVSA VTNFEISRYD VDKIMESSTL LPADQVRRRK DGPDALVASA AAALVQAGGA
501: ADYWRQPVAA ASAVTPCGDK QSRHHLDLMS SESLSLLRGV VSMDGDAAGA HGMGNSSSAR MSGASSLATS LSNSREQSPD QGGGLAMLFA RPAVPKLASS
601: LPMGSWVSSP TPARPGVSVA HMSVFAAWAD A

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.