Factsheet for HORVU1Hr1G080350.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G362500.1	Wheat	nucleus	95.56	94.16
TraesCS1A01G357800.1	Wheat	nucleus	95.8	93.95
Zm00001d011134_P001	Maize	nucleus	68.4	65.95
EES19874	Sorghum	nucleus	70.62	64.56
Os05t0536250-00	Rice	nucleus	66.17	62.18
KRH01131	Soybean	nucleus	47.9	49.49
KRH40131	Soybean	nucleus	47.41	48.98
VIT_14s0108g00050.t01	Wine grape	nucleus	47.65	47.77
Solyc06g066390.1.1	Tomato	nucleus	46.91	46.91
PGSC0003DMT400006170	Potato	nucleus	45.19	45.07
Solyc08g076380.1.1	Tomato	nucleus	44.44	41.38
HORVU5Hr1G045290.10	Barley	nucleus, plastid	36.05	33.49
HORVU4Hr1G052880.2	Barley	nucleus	16.54	31.46
HORVU7Hr1G111060.4	Barley	nucleus	32.59	28.27
HORVU4Hr1G076200.4	Barley	nucleus	29.88	21.96
HORVU5Hr1G098450.2	Barley	nucleus	32.59	20.92
HORVU2Hr1G087310.1	Barley	nucleus	33.33	20.49
HORVU6Hr1G057060.3	Barley	nucleus	32.59	20.25
HORVU3Hr1G089160.2	Barley	nucleus	32.35	19.85
HORVU4Hr1G065990.2	Barley	nucleus	30.62	19.56

Protein Annotations

MapMan:15.5.7.3	MapMan:26.9.2.2	Gene3D:3.30.730.10	UniProt:A0A287GFQ4	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G080350	EnsemblPlants:HORVU1Hr1G080350.3	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847
PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF10	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B46A5A9
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:525093748..525095289

Molecular Weight (calculated)

43952.0 Da

IEP (calculated)

9.368

GRAVY (calculated)

-0.419

Length

405 amino acids

Sequence
(BLAST)

001: MVKSEIESYA GQPAVVGGGG GGEVVVRRRR REPTLGPVGG GIGKASLPGV AVKRSSRFRG VSRHRWTGRY EAHLWDKNSW NPTQRKKGKQ VYLGAYDEEE
101: AAARAYDLAA LKYWGATTYT NFPVMDYEKE LKIMETLTKE EYLASLRRKS SGFSRGVSKY RGVARHHQNG RWEARIGRVF GNKYLYLGTY GTQEEAARAY
201: DIAAIEYKGV NAVTNFDLRS YITWLKPPVA GPAVLADHLL ASMHTQLPPS PVEHESFLPA EAQIMLPPMT TAAPGNPFIL DHSAAVLGGG LRRRSSPPSS
301: STALSLLLKS TMFKQLVERN DPDSPQGTGG CADRVGELPA GEGSYEYRDF FHGVSSDVCG LFSSPSNICG NAGFQGGVAA SCYGNGERMA PTTTPWDGFG
401: DIAAL

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.