Factsheet for Zm00001d011134_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19874	Sorghum	nucleus	90.0	85.33
Os05t0536250-00	Rice	nucleus	72.86	71.0
HORVU1Hr1G080350.3	Barley	nucleus	65.95	68.4
TraesCS1D01G362500.1	Wheat	nucleus	65.48	66.91
TraesCS1A01G357800.1	Wheat	nucleus	65.71	66.83
VIT_14s0108g00050.t01	Wine grape	nucleus	48.57	50.49
KRH01131	Soybean	nucleus	46.67	50.0
KRH40131	Soybean	nucleus	46.19	49.49
Solyc06g066390.1.1	Tomato	nucleus	46.19	47.9
PGSC0003DMT400006170	Potato	nucleus	44.76	46.31
Solyc08g076380.1.1	Tomato	nucleus	44.29	42.76
Zm00001d045378_P001	Maize	nucleus	48.33	41.34
Zm00001d020540_P002	Maize	plastid	39.52	40.39
Zm00001d005016_P005	Maize	plastid	34.76	36.68
Zm00001d032144_P001	Maize	nucleus	35.0	36.3
Zm00001d052405_P002	Maize	plastid	29.52	28.51
Zm00001d043116_P002	Maize	nucleus	30.95	28.14
Zm00001d028919_P001	Maize	extracellular, nucleus	26.9	26.59
Zm00001d046913_P001	Maize	nucleus	30.24	26.19
Zm00001d027878_P002	Maize	nucleus	29.76	23.15
Zm00001d018731_P001	Maize	nucleus	32.62	22.35
Zm00001d007840_P001	Maize	nucleus	30.71	21.5
Zm00001d017207_P001	Maize	nucleus	32.62	20.27
Zm00001d034204_P001	Maize	nucleus	30.95	19.43
Zm00001d048004_P001	Maize	nucleus	30.0	19.15
Zm00001d042492_P001	Maize	nucleus	31.9	18.98
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	31.67	18.68

Protein Annotations

MapMan:15.5.7.3	MapMan:26.9.2.2	Gene3D:3.30.730.10	UniProt:A0A1D6FWS4	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:AQK95820.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF10	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000843F922	EnsemblPlantsGene:Zm00001d011134
EnsemblPlants:Zm00001d011134_P001	EnsemblPlants:Zm00001d011134_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 117Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr8:+:140017045..140019085

Molecular Weight (calculated)

45596.6 Da

IEP (calculated)

9.239

GRAVY (calculated)

-0.563

Length

420 amino acids

Sequence
(BLAST)

001: MMLVKSEIES CYPGPSAAAP SVVIGGAPDG VEGGHRHQVV RRRRREPPLL APIGGGGGIG KPLPSITVKR SSRFRGVSRH RWTGRFEAHL WDKNSWNPTQ
101: RKKGKQVYLG AYDEEEAAAR AYDLAALKYW GPTTYTNFPV MDYEKELKVM ENLTKEEYLA SLRRKSSGFS RGVSKYRGVA RHHQNGRWEA RIGRVFGNKY
201: LYLGTYSTQE EAARAYDIAA IEYKGVNAVT NFDLRSYITW LKPSAPPAAF NREALVAQAA PAEQLQLHHH PAETAQMLPR GNPFLLDHMT SSGGGQEASM
301: STVSPGGMRR RGSSTALSLL LKSSMFRQLV EKNSDAEEGA GDGEAAAAAG SGHPGPGDAY EYHNFFQGEA PPDMCDLFSS GGGGGGGHAR VAGFHRDIAA
401: CYDGEGLDGW SGFGNMPSLQ

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.