Factsheet for Zm00001d027878_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	30.19	95.88
OQU93137	Sorghum	nucleus	83.15	78.63
TraesCS4A01G011600.1	Wheat	nucleus	67.04	68.56
TraesCS4D01G291300.1	Wheat	nucleus	66.48	68.25
TraesCS4B01G292900.1	Wheat	nucleus	66.48	67.99
HORVU4Hr1G076200.4	Barley	nucleus	66.3	64.97
VIT_09s0002g01370.t01	Wine grape	nucleus	45.74	45.83
Zm00001d046913_P001	Maize	nucleus	37.78	42.06
KRH06179	Soybean	nucleus	44.26	41.64
KRH47597	Soybean	nucleus	44.44	41.45
GSMUA_Achr1P12410_001	Banana	nucleus	40.37	39.56
Zm00001d028919_P001	Maize	extracellular, nucleus	29.63	37.65
Zm00001d018731_P001	Maize	nucleus	39.07	34.42
Zm00001d007840_P001	Maize	nucleus	37.78	34.0
Zm00001d017207_P001	Maize	nucleus	40.0	31.95
Zm00001d005016_P005	Maize	plastid	22.96	31.16
Zm00001d020540_P002	Maize	plastid	23.52	30.9
Zm00001d048004_P001	Maize	nucleus	37.41	30.7
Zm00001d042492_P001	Maize	nucleus	39.63	30.31
Zm00001d032144_P001	Maize	nucleus	22.41	29.88
Zm00001d011134_P001	Maize	nucleus	23.15	29.76
Zm00001d034204_P001	Maize	nucleus	36.85	29.75
Zm00001d045378_P001	Maize	nucleus	22.78	25.05
Zm00001d043116_P002	Maize	nucleus	21.3	24.89
Zm00001d052405_P002	Maize	plastid	20.0	24.83
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	31.48	23.88

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6JQB7	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONL94182.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000843EEB9	EnsemblPlantsGene:Zm00001d027878
EnsemblPlants:Zm00001d027878_P002	EnsemblPlants:Zm00001d027878_T002	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 130AP2-EREBP-type transcription factor

Coordinates

chr1:-:16356238..16360518

Molecular Weight (calculated)

57292.7 Da

IEP (calculated)

7.567

GRAVY (calculated)

-0.538

Length

540 amino acids

Sequence
(BLAST)

001: MDMNNGWLGF SLSPSAASRG GYGYGDGGGG ASASACGDGE GSCPSPAAAA SPLPLVAMPL DDSLHYSSAP DWRHGAAEAK GPKLEDFMSI TCSNKSSGRS
101: LYDSCGHHDD EQASKYHEVH GIHPLSCGSY YHGCISSGGG GGGGIGLGIN MNAPPCTGGF PDHQHHQFVP SSHHGQYFLG APAASAGPPA GAAMPMYNAG
201: GGSVVGGSMS ISGIKSWLRE AMYVPPERPA AAALSLAVTD DVPPAEPPQL LPAPLPVHRK PAQTFGQRTS QFRGVTRHRW TGRYEAHLWD NTCRKEGQTR
301: KGRQGGYDRE EKAARAYDLA ALKYWGPSTH INFPLSHYEK ELEEMKHMSR QEFIAHLRRN SSGFSRGASM YRGVTRHHQH GRWQARIGRV AGNKDLYLGT
401: FSTQEEAAEA YDIAAIKFRG LNAVTNFDIS KYDVKRICAS THLIGGGDAC RRSPTRPPDA APALAGGADR SSDAPGDQAA SDNSDTSDGH RGAHLLHGLQ
501: YGHPMKLEAG EGSSWMAAAA AARPVPGVHQ LPMFALWNDC

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.