Factsheet for HORVU4Hr1G076200.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	30.31	98.24
TraesCS4D01G291300.1	Wheat	nucleus	88.38	92.59
TraesCS4B01G292900.1	Wheat	nucleus	88.02	91.86
TraesCS4A01G011600.1	Wheat	nucleus	87.84	91.67
Zm00001d027878_P002	Maize	nucleus	64.97	66.3
OQU93137	Sorghum	nucleus	65.34	63.05
VIT_09s0002g01370.t01	Wine grape	nucleus	44.28	45.27
HORVU7Hr1G111060.4	Barley	nucleus	36.48	43.04
KRH06179	Soybean	nucleus	43.01	41.29
KRH47597	Soybean	nucleus	43.01	40.93
HORVU4Hr1G052880.2	Barley	nucleus	15.61	40.38
GSMUA_Achr1P12410_001	Banana	nucleus	39.56	39.56
HORVU6Hr1G057060.3	Barley	nucleus	38.48	32.52
HORVU2Hr1G087310.1	Barley	nucleus	37.21	31.11
HORVU3Hr1G089160.2	Barley	nucleus	37.02	30.91
HORVU4Hr1G065990.2	Barley	nucleus	35.21	30.6
HORVU1Hr1G080350.3	Barley	nucleus	21.96	29.88
HORVU5Hr1G098450.2	Barley	nucleus	34.12	29.79
HORVU5Hr1G045290.10	Barley	nucleus, plastid	22.87	28.9

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A287PQF1	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU4Hr1G076200	EnsemblPlants:HORVU4Hr1G076200.4	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B483D17
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:600308981..600312778

Molecular Weight (calculated)

58965.5 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.600

Length

551 amino acids

Sequence
(BLAST)

001: EKRSSSFGSS FLSFSPPKLF RVVPELEMDM NSGWLGFSLS SSSAARGYGE GGGDGGGDGG SCSSPAAAAG APSSPIVGVP LHSAGGASVQ YDGPDWRHQH
101: AEAKGPKLED FMSVGYGNGN DRSSGIYDAG HADQLKYHHH QDVHAYPASP YFQGNGGGGA VIGLDINNAP PPPHCTGVPD HHFMPAHHGQ YSLCTPNQSG
201: AGAMAAAPMY SSAAGFDGNT NMSISGIKSW LRQSMYVPER SPAVPPSVHA APNEPPLPAP SVPAPRKLAQ TFGQRTSQFR GVTRHRWTGR YEAHLWDNTC
301: RKEGQTRKGR QGELGGYDKE EKAARAYDLA ALKYWGPTTH INFPLSTYEK ELEEMKHMTR QEFIAHLRRN SSGFSRGASM YRGVTRHHQH GRWQARIGRV
401: AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG LSAVTNFDIS KYDVKRICAS SHLIGGDLAC RRSPTRDAPA LPSGVSVAVE RPEAGASDNS SDASDGHRGA
501: HLLHGLQYAH AMKYEAGEGS NGGGGWTRPV AGVPGVHPHP HPLPVFALWN E

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.