CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	27.87	94.12
KRH47597	Soybean	nucleus	93.9	93.09
VIT_09s0002g01370.t01	Wine grape	nucleus	58.88	62.71
GSMUA_Achr1P21950_001	Banana	nucleus	45.82	46.71
TraesCS4D01G291300.1	Wheat	nucleus	42.68	46.58
TraesCS4B01G292900.1	Wheat	nucleus	42.33	46.02
TraesCS4A01G011600.1	Wheat	nucleus	42.33	46.02
KRH47304	Soybean	nucleus	22.47	44.48
Zm00001d027878_P002	Maize	nucleus	41.64	44.26
KRG99477	Soybean	nucleus	33.45	43.74
KRH45549	Soybean	nucleus	33.97	43.62
HORVU4Hr1G076200.4	Barley	nucleus	41.29	43.01
KRH24688	Soybean	nucleus	41.29	42.86
OQU93137	Sorghum	nucleus	42.51	42.73
KRH44591	Soybean	plastid	22.47	41.21
KRH74476	Soybean	nucleus	35.89	40.39
KRH39470	Soybean	nucleus	35.71	40.04
KRH29690	Soybean	nucleus	40.59	38.96
KRH19032	Soybean	nucleus	35.37	38.45
KRG88628	Soybean	nucleus	31.88	37.73
KRH63091	Soybean	plastid	22.3	36.89
KRH55024	Soybean	plastid	22.47	36.75
KRH34229	Soybean	nucleus	36.59	36.52
KRH02858	Soybean	nucleus	36.41	36.22
KRH15454	Soybean	nucleus	37.63	36.06
KRH52140	Soybean	nucleus	40.42	35.15
KRH61449	Soybean	nucleus	40.59	35.14
KRH72352	Soybean	nucleus	22.3	35.07
KRH01131	Soybean	nucleus	23.87	34.95
KRH58159	Soybean	nucleus	40.42	34.89
KRH02994	Soybean	nucleus	22.3	34.59
KRH28322	Soybean	nucleus	36.76	34.48
KRH40131	Soybean	nucleus	23.52	34.44
KRH77164	Soybean	nucleus	36.76	34.31
KRH04380	Soybean	nucleus	40.07	33.63
KRH40267	Soybean	nucleus	40.94	33.24
KRG99157	Soybean	nucleus	22.65	32.02
KRH45852	Soybean	nucleus	22.65	31.94
KRH13193	Soybean	nucleus	22.82	31.8
KRH44733	Soybean	nucleus	22.65	30.52
KRH00957	Soybean	nucleus	36.93	29.9
Os03t0770700-01	Rice	plastid	15.16	25.66

Protein Annotations

EntrezGene:100809762	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02009816	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_16G007400	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7MEH0	EnsemblPlants:KRH06179
ProteinID:KRH06179	ProteinID:KRH06179.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002965DBD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr16:+:605287..609287

Molecular Weight (calculated)

63427.7 Da

IEP (calculated)

6.428

GRAVY (calculated)

-0.817

Length

574 amino acids

Sequence
(BLAST)

001: MSNWLGFSLT PHLRIDEEFE RENQERGGGY HHPSPSCHPH LSVMPLRSDG SLCVADSFSH SAASQEWRYD SAIGGGNSNE EGPKLEDFLG CYSNSPAKVF
101: CQDSQPDQNQ SQNNVSKINV NVAPSFCTNN SEIETGDNLT NPSSLLHSFH AYNDNSHALI PTNGMYKSWL AQTQFSSDGK PSNEANGCNF QSLSLTMSPS
201: VQNGVGAISS VQVNEDSRKR VMAKSHAREP VPRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA AKAYDLAALK
301: YWGPTTHINF PLSTYEKELE EMKHMTRQEF VANLRRKSSG FSRGASVYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGTSA
401: VTNFDISRYD VKRICSSSTL IAGDLAKRSP KESPAPVPAS DFNSCGSSPM PLVSQPPPLA ITDGEHSDEL SNMMWNANNS DEQAQNESGG AEFNNNVTES
501: SSSQQVSPSS NKDALNPQSP NEFGVSGADY GHGYFTLDGP KYDDGNNEND HMSTNRLGNL GLVNQVPMFA LWNE

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.