CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15454	Soybean	nucleus	69.28	56.09
KRH61449	Soybean	nucleus	69.28	50.68
KRH52140	Soybean	nucleus	68.45	50.3
VIT_18s0001g08610.t01	Wine grape	nucleus	68.87	49.55
KRH58159	Soybean	nucleus	52.99	38.65
KRH04380	Soybean	nucleus	54.23	38.45
KRH28322	Soybean	nucleus	46.8	37.09
TraesCS2D01G256600.2	Wheat	nucleus	45.77	37.0
TraesCS2B01G268100.2	Wheat	nucleus	45.77	37.0
TraesCS5B01G410200.1	Wheat	nucleus	47.84	36.94
TraesCS2A01G267600.2	Wheat	nucleus	45.57	36.77
KRH77164	Soybean	nucleus	46.39	36.59
TraesCS5D01G415500.1	Wheat	nucleus	47.01	36.42
Zm00001d018731_P001	Maize	nucleus	45.77	36.22
KRH47304	Soybean	nucleus	21.65	36.21
Zm00001d007840_P001	Maize	nucleus	44.54	36.0
HORVU5Hr1G098450.2	Barley	nucleus	46.39	35.66
TraesCS5A01G405400.1	Wheat	nucleus	46.19	35.61
EER93382	Sorghum	nucleus	47.01	35.19
Zm00001d034204_P001	Maize	nucleus	47.63	34.53
KRG99477	Soybean	nucleus	30.31	33.49
KRH44591	Soybean	plastid	21.44	33.23
KXG34322	Sorghum	nucleus	46.6	33.19
KRH45549	Soybean	nucleus	29.9	32.44
KRH06179	Soybean	nucleus	37.73	31.88
Os07t0124700-01	Rice	nucleus	21.65	31.72
KRH47597	Soybean	nucleus	37.73	31.61
KRH39470	Soybean	nucleus	31.75	30.08
KRH74476	Soybean	nucleus	31.55	30.0
KRH63091	Soybean	plastid	21.03	29.39
KRH24688	Soybean	nucleus	33.2	29.11
KRH19032	Soybean	nucleus	31.34	28.79
KRH55024	Soybean	plastid	20.82	28.77
KRH34229	Soybean	nucleus	34.02	28.7
KRH72352	Soybean	nucleus	21.44	28.49
KRH02994	Soybean	nucleus	21.44	28.11
KRH29690	Soybean	nucleus	33.81	27.42
KRH40267	Soybean	nucleus	38.97	26.73
KRH02858	Soybean	nucleus	31.75	26.69
KRH01131	Soybean	nucleus	21.24	26.28
KRH13193	Soybean	nucleus	22.27	26.21
KRH40131	Soybean	nucleus	21.03	26.02
KRH44733	Soybean	nucleus	22.06	25.12
KRH45852	Soybean	nucleus	20.21	24.08
KRG99157	Soybean	nucleus	20.0	23.89
KRH00957	Soybean	nucleus	34.02	23.27

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A0R0E4E0	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_U0377002	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRG88628	ProteinID:KRG88628	ProteinID:KRG88628.1
ProteinID:KRG88629.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0006ED7D3A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chrscaffold_44:+:4330..7675

Molecular Weight (calculated)

53984.5 Da

IEP (calculated)

7.519

GRAVY (calculated)

-0.812

Length

485 amino acids

Sequence
(BLAST)

001: MKSMNDSNTV DDGNNHNNWL GFSLSPHMKM DVVTSSTTTG PHHPHQHHHH HHYYHHPHEA SAAACNNNNN TVPTNFYMSP SHLNTSGICY GVGENSAFHT
101: PLAMMPLKSD GSLCIMEALT RSQTQMMVPT SSPKLEDFLG GATMGAQDYG THEREAMALS LDSIYYSNQN AEPETNRDHS SSLDLLSDHF RHQTHHHPYY
201: SGLGIYQVEE EETKEQPHVA VCSSQMPQVV EGSIACFKNW VPTREYSSSS TQQNLEQHQV NSSSSGGLGE DNNVAYGNVG VGSSVGCGEL QSLSLSMSPG
301: SQSSCVTVPT QISSSGTDSV AVDAKKRGSS KLGQKQPVHR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQT RKGRQVYLGG YDMEEKAARA
401: YDLAALKYWG PSTHINFPLE NYQTQLEEMK NMSRQEYVAH LRRKSSGFSR GASMYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTF

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.