CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52140	Soybean	nucleus	91.7	92.12
KRG88628	Soybean	nucleus	50.68	69.28
KRH15454	Soybean	nucleus	61.69	68.28
GSMUA_Achr8P26510_001	Banana	nucleus	33.48	65.68
GSMUA_Achr3P30690_001	Banana	nucleus	52.94	60.21
Os07t0124700-01	Rice	nucleus	29.71	59.52
GSMUA_Achr3P15150_001	Banana	nucleus	47.36	56.99
KRH58159	Soybean	nucleus	55.51	55.34
GSMUA_Achr7P27500_001	Banana	nucleus	50.98	54.87
KRH04380	Soybean	nucleus	55.51	53.8
KRH28322	Soybean	nucleus	49.62	53.76
KRH77164	Soybean	nucleus	49.32	53.17
Zm00001d018731_P001	Maize	nucleus	46.61	50.41
TraesCS2B01G268100.2	Wheat	nucleus	45.1	49.83
TraesCS2D01G256600.2	Wheat	nucleus	44.95	49.67
TraesCS2A01G267600.2	Wheat	nucleus	44.95	49.58
Zm00001d007840_P001	Maize	nucleus	44.19	48.83
KRH47304	Soybean	nucleus	20.81	47.59
EER93382	Sorghum	nucleus	46.0	47.07
TraesCS5D01G415500.1	Wheat	nucleus	44.04	46.65
TraesCS5B01G410200.1	Wheat	nucleus	43.89	46.34
Zm00001d034204_P001	Maize	nucleus	46.61	46.19
TraesCS5A01G405400.1	Wheat	nucleus	43.74	46.1
KXG34322	Sorghum	nucleus	46.76	45.52
HORVU5Hr1G098450.2	Barley	nucleus	43.14	45.32
KRH44591	Soybean	plastid	20.81	44.09
KRG99477	Soybean	nucleus	28.96	43.74
KRH45549	Soybean	nucleus	28.66	42.51
KRH06179	Soybean	nucleus	35.14	40.59
KRH63091	Soybean	plastid	21.12	40.35
KRH47597	Soybean	nucleus	34.69	39.72
KRH74476	Soybean	nucleus	30.32	39.41
KRH55024	Soybean	plastid	20.66	39.03
KRH39470	Soybean	nucleus	29.86	38.67
KRH34229	Soybean	nucleus	33.48	38.61
KRH72352	Soybean	nucleus	21.12	38.36
KRH02994	Soybean	nucleus	21.12	37.84
KRH19032	Soybean	nucleus	30.02	37.69
KRH24688	Soybean	nucleus	30.47	36.53
KRH02858	Soybean	nucleus	30.47	35.01
KRH40267	Soybean	nucleus	37.25	34.94
KRH01131	Soybean	nucleus	20.51	34.69
KRH40131	Soybean	nucleus	20.36	34.44
KRH29690	Soybean	nucleus	30.92	34.28
KRH45852	Soybean	nucleus	20.97	34.15
KRH13193	Soybean	nucleus	21.12	33.98
KRG99157	Soybean	nucleus	20.66	33.74
KRH44733	Soybean	nucleus	20.97	32.63
KRH00957	Soybean	nucleus	33.94	31.73

Protein Annotations

EntrezGene:100787223	MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A0R4J333	EMBL:ACUP02002164	InterPro:AP2-like_transcript_factor
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_04G047900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH61449
ProteinID:KRH61449	ProteinID:KRH61449.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0000050DD7	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:3858052..3862348

Molecular Weight (calculated)

73459.9 Da

IEP (calculated)

7.863

GRAVY (calculated)

-0.688

Length

663 amino acids

Sequence
(BLAST)

001: MKRINESNNT DDGNNHNWLG FSLSPHMKME ATSAATVPTT FYMSPSQSHL SNFGMCYGVG ENGNFHSPLT VMPLKSDGSL CILEALKRSQ TQVMVPTSSP
101: KLEDFLGGAT MGTHEYGSHE RGLSLDSIYY NSQNAEAQPN RDLLSQPFRQ QGHMSVQTHP YYSGLACHGL YQAPLEEETT KETHVSDCSS LMPQMTEGLK
201: NWVAPTREFS THQQVLEQQM NCGMGNERNG VSLGSVGCGE LQSLSLSMSP GSQSSCVTAP SGTDSVAVDA KKRGHAKLGQ KQPVHRKSID TFGQRTSQYR
301: GVTRHRWTGR YEAHLWDNSC KKEGQTRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH INFSIENYQV QLEEMKNMSR QEYVAHLRRK SSGFSRGASI
401: YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDVAAIKFRG ANAVTNFDIS RYDVERIMAS SNLLAGELAR RKKDNDPRNK DIDYNKSVVT
501: SVNNEETVQV QAGNNNNEND SEWKMVLFNH PSQQQQANGN GSDQKIMNCG NYRNSAFSMA LQDLIGIDSV GSGQHNMLDE SSKIGTHFSN TSSLVTSLSS
601: SREASPEKRG PSLLFPMPPM ETKIVNPIGT SVTSWLPSPT VQMRPSPAIS LSHLPVFASW TDT

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.