CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45549	Soybean	nucleus	90.89	89.26
KRH74476	Soybean	nucleus	65.15	56.08
KRH39470	Soybean	nucleus	65.15	55.86
GSMUA_Achr1P24940_001	Banana	nucleus	38.04	49.55
TraesCS4D01G182100.1	Wheat	nucleus	39.64	46.28
TraesCS4B01G180600.1	Wheat	nucleus	39.41	46.13
TraesCS4A01G123800.1	Wheat	nucleus	38.95	45.24
HORVU4Hr1G052880.2	Barley	nucleus	21.64	44.6
KRH47304	Soybean	nucleus	29.16	44.14
KRH44591	Soybean	plastid	29.16	40.89
KXG39508	Sorghum	extracellular, nucleus	39.18	40.28
Os03t0313100-01	Rice	extracellular, nucleus	39.41	40.14
Zm00001d028919_P001	Maize	extracellular, nucleus	37.81	39.06
KRH19032	Soybean	nucleus	44.87	37.31
KRH63091	Soybean	plastid	29.16	36.89
KRH55024	Soybean	plastid	29.16	36.47
KRH24688	Soybean	nucleus	44.87	35.62
KRH72352	Soybean	nucleus	29.16	35.07
KRH02994	Soybean	nucleus	29.39	34.86
KRH02858	Soybean	nucleus	44.65	33.97
KRH06179	Soybean	nucleus	43.74	33.45
KRH29690	Soybean	nucleus	45.1	33.11
KRH34229	Soybean	nucleus	43.28	33.04
KRH47597	Soybean	nucleus	43.28	32.82
KRH01131	Soybean	nucleus	28.25	31.63
KRH40131	Soybean	nucleus	28.25	31.63
KRH13193	Soybean	nucleus	29.61	31.55
GSMUA_Achr11P...	Banana	nucleus	39.41	31.34
KRG99157	Soybean	nucleus	28.93	31.28
KRH45852	Soybean	nucleus	28.93	31.2
KRH15454	Soybean	nucleus	41.46	30.38
KRG88628	Soybean	nucleus	33.49	30.31
KRH40267	Soybean	nucleus	48.52	30.13
KRH44733	Soybean	nucleus	29.16	30.05
KRH28322	Soybean	nucleus	41.0	29.41
KRH77164	Soybean	nucleus	41.0	29.27
KRH52140	Soybean	nucleus	43.74	29.09
KRH61449	Soybean	nucleus	43.74	28.96
KRH58159	Soybean	nucleus	43.28	28.57
KRH04380	Soybean	nucleus	43.05	27.63
KRH00957	Soybean	nucleus	43.05	26.66

Protein Annotations

EntrezGene:100795280	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02011071	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_18G148000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7MSE3	EnsemblPlants:KRG99477
ProteinID:KRG99477	ProteinID:KRG99477.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF33	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000233F0DC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:+:25334272..25341458

Molecular Weight (calculated)

48380.3 Da

IEP (calculated)

8.627

GRAVY (calculated)

-0.551

Length

439 amino acids

Sequence
(BLAST)

001: MAGATKNWLT FSLTPMETQF GPYDITTPSH CFNDNNFYGW ANSKGVMDSQ SETQQLAVPK MEDFYFGDHQ QDLKAIVPGF KALSGTNSVD DSAPNKTTTR
101: VAPAELTGAH SGESCKGSAL SLCDVAANGS DDSNDNKAIV AVGFDTRKKV AHTFGQRTSI YRGVTRHRWT GRYEAHLWDN SCRREGQARK GRQVYLGGYD
201: KEDKAARAYD LAALKYWGPK ATTNFPISNY TKELEEMKHV GKQEFIASLR RKSSGFSRGA SAYRGVTRHH QQGRWQARIG RVAGNKDLYL GTFSTEEEAA
301: EAYDIAAIKF RGASAVTNFE MRRYDVDAIL NNSLPVGGIA KRFKVSPETE NKALVSTIQP PQNTNASSSI NFSTIQPVSS IPYDSAITCY PHNLFHHFNP
401: TNGESSTAEF AATMTDAIAL ATLPPLAVPG FFVWPHQNY

Best Arabidopsis Sequence Match ( AT5G10510.6 )
(BLAST)

001: MMAPMTNWLT FSLSPMEMLR SSDQSQFVSY DASSAASSSP YLLDNFYGWS NQKPQEFFKE EAQLAAAASM ADSTILTTFV DPQSHHSQNH IPKLEDFLGD
101: SSSIVRYSDN SQTDTQDSSL TQIYDPRHHH NQTGFYSDHH DFKTMAGFQS AFSTNSGSEV DDSASIGRTH LAGDYLGHVV ESSGPELGFH GGSTGALSLG
201: VNVNNNTNHR NDNDNHYRGN NNGERINNNN NNDNEKTDSE KEKAVVAVET SDCSNKKIAD TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQARKGR
301: QVYLGGYDKE DKAARAYDLA ALKYWNATAT TNFPITNYSK EVEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT
401: FATEEEAAEA YDIAAIKFRG INAVTNFEMN RYDVEAIMKS ALPIGGAAKR LKLSLEAAAS SEQKPILGHH QLHHFQQQQQ QQQLQLQSSP NHSSINFALC
501: PNSAVQSQQI IPCGIPFEAA ALYHHHQQQQ QHQQQQQQQN FFQHFPANAA SDSTGSNNNS NVQGTMGLMA PNPAEFFLWP NQSY

Arabidopsis Description

AIL6AINTEGUMENTA-like 6 [Source:UniProtKB/TrEMBL;Acc:F4KGW7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.