Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47304 | Soybean | nucleus | 22.09 | 43.79 |
| KRG99477 | Soybean | nucleus | 33.04 | 43.28 |
| KRH45549 | Soybean | nucleus | 33.22 | 42.73 |
| KRH40267 | Soybean | nucleus | 52.0 | 42.29 |
| GSMUA_Achr9P07890_001 | Banana | nucleus | 45.22 | 41.67 |
| KRH19032 | Soybean | nucleus | 37.57 | 40.91 |
| KRH44591 | Soybean | plastid | 22.26 | 40.89 |
| GSMUA_Achr6P28550_001 | Banana | nucleus | 45.22 | 40.69 |
| KRH74476 | Soybean | nucleus | 35.65 | 40.2 |
| KRH39470 | Soybean | nucleus | 35.48 | 39.84 |
| KRH24688 | Soybean | nucleus | 37.91 | 39.42 |
| KRH00957 | Soybean | nucleus | 48.0 | 38.93 |
| KRH55024 | Soybean | plastid | 23.3 | 38.18 |
| KRH02858 | Soybean | nucleus | 38.09 | 37.95 |
| KRH63091 | Soybean | plastid | 22.78 | 37.75 |
| KRH06179 | Soybean | nucleus | 36.52 | 36.59 |
| KRH47597 | Soybean | nucleus | 36.35 | 36.1 |
| KRH29690 | Soybean | nucleus | 37.22 | 35.79 |
| KRH72352 | Soybean | nucleus | 22.43 | 35.34 |
| KRH01131 | Soybean | nucleus | 23.83 | 34.95 |
| KRH02994 | Soybean | nucleus | 22.43 | 34.86 |
| KRH40131 | Soybean | nucleus | 23.48 | 34.44 |
| KRH15454 | Soybean | nucleus | 35.48 | 34.06 |
| KRG88628 | Soybean | nucleus | 28.7 | 34.02 |
| KRH52140 | Soybean | nucleus | 38.61 | 33.64 |
| KRG99157 | Soybean | nucleus | 23.65 | 33.5 |
| KRH61449 | Soybean | nucleus | 38.61 | 33.48 |
| KRH58159 | Soybean | nucleus | 38.43 | 33.23 |
| KRH77164 | Soybean | nucleus | 35.48 | 33.17 |
| KRH45852 | Soybean | nucleus | 23.48 | 33.17 |
| KRH13193 | Soybean | nucleus | 23.48 | 32.77 |
| KRH28322 | Soybean | nucleus | 34.43 | 32.35 |
| KRH04380 | Soybean | nucleus | 38.43 | 32.31 |
| KRH44733 | Soybean | nucleus | 23.48 | 31.69 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | UniProt:A0A0R0I2K4 | EMBL:ACUP02006585 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_10G171400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH34229 | ProteinID:KRH34229 |
| ProteinID:KRH34229.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF72 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0006ED9516 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:40494363..40498737
Molecular Weight (calculated)
63708.9 Da
IEP (calculated)
6.766
GRAVY (calculated)
-0.612
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MASMNWLDFS LSPQELPSQP LNDEEDHSQT VTPLLGFNSH EISVTECFDL SSFALVEAPN RNNTHHITPL VLNQRDTFFS PFLDYWNTKG LGTSCSSNQN
101: MDNNQQHPKL ENFLLEKPAT GGGGCPKNTN SIGLSMIKTW LRKQMSSQSD AANTSLSMST TRVSESGTVA LPLLTAGEES SSSKSKQSGI LNVDTVSRKS
201: ADTFGKRTSI YRGVSRHRWT GRYEAHLWDN SSRREGKTSK GKQGGYDKEE KAARAYDLAA LKYWGATTTT TNFPIIHYEK ELEEMKNLTR QEYVASLRRK
301: SSGFSRGASI YRGVTRHHQH GRWQARIGRV AVNKDLYLGT FNTQEEAAEA YDIAAIKFRG LKAVTNFDMN RYDVKSILES STLPIGGAAK RLKDADEQVD
401: LTIMDPQTPH VDSNINIFGA SHHSLALHQP QPYSHLNYTY GQKFWIDSAS VDNNNNSSGS NYVIYGGGDG YAIPMATPTF NIADDDDVVQ NSRSNGLEHN
501: DVKMLGYENV LSSSTDPYHA RDLCYLSQPA SGDTVKGSAY DACNTWVPFV IPSTLALRHT NDLCSGASPF TLLHE
101: MDNNQQHPKL ENFLLEKPAT GGGGCPKNTN SIGLSMIKTW LRKQMSSQSD AANTSLSMST TRVSESGTVA LPLLTAGEES SSSKSKQSGI LNVDTVSRKS
201: ADTFGKRTSI YRGVSRHRWT GRYEAHLWDN SSRREGKTSK GKQGGYDKEE KAARAYDLAA LKYWGATTTT TNFPIIHYEK ELEEMKNLTR QEYVASLRRK
301: SSGFSRGASI YRGVTRHHQH GRWQARIGRV AVNKDLYLGT FNTQEEAAEA YDIAAIKFRG LKAVTNFDMN RYDVKSILES STLPIGGAAK RLKDADEQVD
401: LTIMDPQTPH VDSNINIFGA SHHSLALHQP QPYSHLNYTY GQKFWIDSAS VDNNNNSSGS NYVIYGGGDG YAIPMATPTF NIADDDDVVQ NSRSNGLEHN
501: DVKMLGYENV LSSSTDPYHA RDLCYLSQPA SGDTVKGSAY DACNTWVPFV IPSTLALRHT NDLCSGASPF TLLHE
001: MNSMNNWLGF SLSPHDQNHH RTDVDSSTTR TAVDVAGGYC FDLAAPSDES SAVQTSFLSP FGVTLEAFTR DNNSHSRDWD INGGACNNIN NNEQNGPKLE
101: NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP
401: VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS
501: YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT
101: NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP
401: VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS
501: YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT
Arabidopsis Description
BBMBABY BOOM [Source:UniProtKB/TrEMBL;Acc:A7L9U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.