CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61449	Soybean	nucleus	92.12	91.7
KRG88628	Soybean	nucleus	50.3	68.45
KRH15454	Soybean	nucleus	60.91	67.11
GSMUA_Achr8P26510_001	Banana	nucleus	34.24	66.86
GSMUA_Achr3P30690_001	Banana	nucleus	53.33	60.38
Os07t0124700-01	Rice	nucleus	30.15	60.12
GSMUA_Achr3P15150_001	Banana	nucleus	48.48	58.08
GSMUA_Achr7P27500_001	Banana	nucleus	52.12	55.84
KRH58159	Soybean	nucleus	54.7	54.29
KRH04380	Soybean	nucleus	54.7	52.78
KRH28322	Soybean	nucleus	48.33	52.12
KRH77164	Soybean	nucleus	48.48	52.03
TraesCS2A01G267600.2	Wheat	nucleus	45.76	50.25
TraesCS2B01G268100.2	Wheat	nucleus	45.61	50.17
TraesCS2D01G256600.2	Wheat	nucleus	45.45	50.0
Zm00001d018731_P001	Maize	nucleus	46.36	49.92
Zm00001d007840_P001	Maize	nucleus	44.24	48.67
KRH47304	Soybean	nucleus	20.76	47.24
EER93382	Sorghum	nucleus	46.06	46.91
TraesCS5D01G415500.1	Wheat	nucleus	43.64	46.01
Zm00001d034204_P001	Maize	nucleus	46.52	45.89
TraesCS5B01G410200.1	Wheat	nucleus	43.48	45.7
KXG34322	Sorghum	nucleus	47.12	45.67
TraesCS5A01G405400.1	Wheat	nucleus	43.18	45.31
HORVU5Hr1G098450.2	Barley	nucleus	42.58	44.53
KRH44591	Soybean	plastid	20.76	43.77
KRG99477	Soybean	nucleus	29.09	43.74
KRH45549	Soybean	nucleus	28.64	42.28
KRH06179	Soybean	nucleus	35.15	40.42
KRH47597	Soybean	nucleus	34.7	39.55
KRH63091	Soybean	plastid	20.76	39.48
KRH74476	Soybean	nucleus	30.3	39.22
KRH34229	Soybean	nucleus	33.64	38.61
KRH39470	Soybean	nucleus	29.85	38.48
KRH55024	Soybean	plastid	20.3	38.18
KRH19032	Soybean	nucleus	30.3	37.88
KRH72352	Soybean	nucleus	20.76	37.53
KRH02994	Soybean	nucleus	20.91	37.3
KRH24688	Soybean	nucleus	31.06	37.07
KRH02858	Soybean	nucleus	30.91	35.36
KRH01131	Soybean	nucleus	20.76	34.95
KRH29690	Soybean	nucleus	31.52	34.78
KRH40131	Soybean	nucleus	20.61	34.69
KRH45852	Soybean	nucleus	21.36	34.64
KRH40267	Soybean	nucleus	36.97	34.51
KRG99157	Soybean	nucleus	21.06	34.24
KRH13193	Soybean	nucleus	21.06	33.74
KRH44733	Soybean	nucleus	20.91	32.39
KRH00957	Soybean	nucleus	33.33	31.03

Protein Annotations

EntrezGene:100802454	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02003407	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_06G049200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7KT57	EnsemblPlants:KRH52140
ProteinID:KRH52140	ProteinID:KRH52140.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296BA0E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:3693119..3697685

Molecular Weight (calculated)

73133.4 Da

IEP (calculated)

7.757

GRAVY (calculated)

-0.672

Length

660 amino acids

Sequence
(BLAST)

001: MKRMNESNNT DDGNNHNWLG FSLSPHMKME VTSAATVSDN NVPTTFYMSP SHMSNSGMCY SVGENGNFHS PLTVMPLKSD GSLGILEALN RSQTQVMVPT
101: SSPKLEDFLG GATMGTHEYG NHERGLSLDS IYYNSQNAEA QPNRNLLSHP FRQQGHVNVE THPYYSVFAC RGLYQAPSEE EATKETHVSV MPQMTGGGLQ
201: NWVAPTREYS THQQILEQQM NCGIWNERSG VSVGTVGCGE LQSLSLSMSP GSQSSCVTAP SGTDSVAVDA KKRGHAKLGQ KQPVHRKSID TFGQRTSQYR
301: GVTRHRWTGR YEAHLWDNSC KKEGQTRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH INFSIENYQV QLEEMKNMSR QEYVAHLRRK SSGFSRGASI
401: YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG ANAVTNFDIS RYDVERIMAS SNLLAGELAR RNKDNDPRNE AIDYNKSVVT
501: SVNNGETVQV QARNNNENDS EWKMVLFNHP LQQQANGSDH KIMNCGNSRN SAFSMALQDL IGVDSVGSEQ HNMLDDSSKI GTHFSNPSSL VTSLSSSREA
601: SPEKMGPSLL FPKPPPMETK IVNPIGTSVT SWLPSPTVQM RPSPAISLSH LPVFAAWTDT

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.