CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99477	Soybean	nucleus	89.26	90.89
KRH74476	Soybean	nucleus	63.31	55.49
KRH39470	Soybean	nucleus	63.31	55.27
GSMUA_Achr1P24940_001	Banana	nucleus	36.91	48.96
TraesCS4D01G182100.1	Wheat	nucleus	39.37	46.81
TraesCS4B01G180600.1	Wheat	nucleus	39.15	46.67
HORVU4Hr1G052880.2	Barley	nucleus	21.92	46.01
TraesCS4A01G123800.1	Wheat	nucleus	38.7	45.77
KRH47304	Soybean	nucleus	29.08	44.83
KRH44591	Soybean	plastid	29.08	41.53
KXG39508	Sorghum	extracellular, nucleus	38.93	40.75
Os03t0313100-01	Rice	extracellular, nucleus	37.81	39.21
Zm00001d028919_P001	Maize	extracellular, nucleus	37.14	39.06
KRH63091	Soybean	plastid	29.53	38.04
KRH55024	Soybean	plastid	29.53	37.61
KRH19032	Soybean	nucleus	44.3	37.5
KRH72352	Soybean	nucleus	29.75	36.44
KRH02994	Soybean	nucleus	29.98	36.22
KRH24688	Soybean	nucleus	44.07	35.62
KRH02858	Soybean	nucleus	44.3	34.32
KRH06179	Soybean	nucleus	43.62	33.97
KRH47597	Soybean	nucleus	43.18	33.33
KRH34229	Soybean	nucleus	42.73	33.22
KRH29690	Soybean	nucleus	43.85	32.78
KRH13193	Soybean	nucleus	29.53	32.04
KRH40131	Soybean	nucleus	27.74	31.63
KRH01131	Soybean	nucleus	27.74	31.63
KRG99157	Soybean	nucleus	28.19	31.03
GSMUA_Achr11P...	Banana	nucleus	38.26	30.98
KRH45852	Soybean	nucleus	27.96	30.71
KRH44733	Soybean	nucleus	29.08	30.52
KRH40267	Soybean	nucleus	47.87	30.27
KRH15454	Soybean	nucleus	40.27	30.05
KRG88628	Soybean	nucleus	32.44	29.9
KRH28322	Soybean	nucleus	39.37	28.76
KRH61449	Soybean	nucleus	42.51	28.66
KRH52140	Soybean	nucleus	42.28	28.64
KRH77164	Soybean	nucleus	39.37	28.62
KRH58159	Soybean	nucleus	41.83	28.12
KRH04380	Soybean	nucleus	42.06	27.49
KRH00957	Soybean	nucleus	42.95	27.08

Protein Annotations

EntrezGene:100814405	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02005258	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_08G279000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7L9D0	EnsemblPlants:KRH45549
ProteinID:KRH45549	ProteinID:KRH45549.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF33	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296B43A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:37693640..37699454

Molecular Weight (calculated)

48907.6 Da

IEP (calculated)

8.223

GRAVY (calculated)

-0.528

Length

447 amino acids

Sequence
(BLAST)

001: MAGATNWLTF SLTHMEMQQF GPYDTTTHSH CFNDSNFYGW TNSKSVMDSQ SETQQLAVPK MEDFYFGDHQ QDLKAMIVPG FKALSGTNSG SEVDDSTSNK
101: TVTRVAPAAL GGAHSGESNC KGSALTLCDV AANGSDDSNN KAVVAVGFDT RKKVAHTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QARKGRQVYL
201: GGYDKEDKAA RAYDLAALKY WGPTATTNFP ISNYTKELEE MEHAGRQEFI ASLRRKSSGF SRGASAYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFSTE
301: EEAAEAYDIA AIKFRGSSAV TNFEMSRYDV DTILNNSLPV GGVAKRLKVS PATENKALIS TIIQPPQNTN ASSSINFSAI QPVSSIPYDS AITCYPHNFF
401: HHHFNPTNGG TSSSDSAAAA AVTDAIALNT LPPPAVPGFF IWPHQSY

Best Arabidopsis Sequence Match ( AT5G10510.6 )
(BLAST)

001: MMAPMTNWLT FSLSPMEMLR SSDQSQFVSY DASSAASSSP YLLDNFYGWS NQKPQEFFKE EAQLAAAASM ADSTILTTFV DPQSHHSQNH IPKLEDFLGD
101: SSSIVRYSDN SQTDTQDSSL TQIYDPRHHH NQTGFYSDHH DFKTMAGFQS AFSTNSGSEV DDSASIGRTH LAGDYLGHVV ESSGPELGFH GGSTGALSLG
201: VNVNNNTNHR NDNDNHYRGN NNGERINNNN NNDNEKTDSE KEKAVVAVET SDCSNKKIAD TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQARKGR
301: QVYLGGYDKE DKAARAYDLA ALKYWNATAT TNFPITNYSK EVEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT
401: FATEEEAAEA YDIAAIKFRG INAVTNFEMN RYDVEAIMKS ALPIGGAAKR LKLSLEAAAS SEQKPILGHH QLHHFQQQQQ QQQLQLQSSP NHSSINFALC
501: PNSAVQSQQI IPCGIPFEAA ALYHHHQQQQ QHQQQQQQQN FFQHFPANAA SDSTGSNNNS NVQGTMGLMA PNPAEFFLWP NQSY

Arabidopsis Description

AIL6AINTEGUMENTA-like 6 [Source:UniProtKB/TrEMBL;Acc:F4KGW7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.