CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28322	Soybean	nucleus	90.41	90.85
GSMUA_Achr8P26510_001	Banana	nucleus	35.45	64.5
PGSC0003DMT400055210	Potato	nucleus	28.78	61.89
KRH58159	Soybean	nucleus	66.34	61.35
KRH04380	Soybean	nucleus	67.32	60.53
CDX72655	Canola	endoplasmic reticulum, golgi	32.36	59.58
Os07t0124700-01	Rice	nucleus	31.22	58.01
VIT_07s0151g00440.t01	Wine grape	nucleus	58.7	53.24
Solyc02g092050.2.1	Tomato	nucleus	53.82	51.24
GSMUA_Achr3P30690_001	Banana	nucleus	47.97	50.6
GSMUA_Achr3P15150_001	Banana	nucleus	44.88	50.09
CDX75673	Canola	nucleus	44.23	49.63
KRH61449	Soybean	nucleus	53.17	49.32
Bra011782.1-P	Field mustard	nucleus	43.41	48.99
CDX69324	Canola	nucleus	44.06	48.83
AT4G37750.1	Thale cress	nucleus	43.9	48.65
KRH52140	Soybean	nucleus	52.03	48.48
Bra017852.1-P	Field mustard	nucleus	43.74	48.38
KRH15454	Soybean	nucleus	46.83	48.08
GSMUA_Achr7P27500_001	Banana	nucleus	46.83	46.75
KRG88628	Soybean	nucleus	36.59	46.39
CDY44027	Canola	nucleus	41.95	46.15
CDY50260	Canola	nucleus	41.95	46.07
TraesCS2D01G256600.2	Wheat	nucleus	44.72	45.83
Bra010610.1-P	Field mustard	nucleus	40.98	45.57
TraesCS2B01G268100.2	Wheat	nucleus	44.39	45.5
TraesCS2A01G267600.2	Wheat	nucleus	44.39	45.42
KRH47304	Soybean	nucleus	21.3	45.17
Zm00001d018731_P001	Maize	nucleus	44.72	44.86
Zm00001d007840_P001	Maize	nucleus	42.28	43.33
EER93382	Sorghum	nucleus	45.37	43.06
TraesCS5B01G410200.1	Wheat	nucleus	43.09	42.2
TraesCS5D01G415500.1	Wheat	nucleus	42.93	42.17
KRH44591	Soybean	plastid	21.3	41.85
TraesCS5A01G405400.1	Wheat	nucleus	42.6	41.65
Zm00001d034204_P001	Maize	nucleus	45.04	41.41
HORVU5Hr1G098450.2	Barley	nucleus	42.44	41.36
KRG99477	Soybean	nucleus	29.27	41.0
KXG34322	Sorghum	nucleus	45.2	40.82
KRH45549	Soybean	nucleus	28.62	39.37
KRH63091	Soybean	plastid	22.11	39.19
KRH55024	Soybean	plastid	21.95	38.46
KRH74476	Soybean	nucleus	30.73	37.06
CDY71263	Canola	nucleus	19.51	36.81
KRH06179	Soybean	nucleus	34.31	36.76
KRH02994	Soybean	nucleus	21.95	36.49
KRH47597	Soybean	nucleus	34.31	36.44
KRH72352	Soybean	nucleus	21.63	36.44
KRH39470	Soybean	nucleus	30.24	36.33
KRH19032	Soybean	nucleus	30.73	35.8
KRH34229	Soybean	nucleus	33.17	35.48
KRH24688	Soybean	nucleus	31.71	35.26
KRH01131	Soybean	nucleus	22.28	34.95
KRH40131	Soybean	nucleus	22.11	34.69
KRH13193	Soybean	nucleus	22.76	33.98
KRH45852	Soybean	nucleus	22.28	33.66
KRG99157	Soybean	nucleus	22.11	33.5
KRH02858	Soybean	nucleus	31.38	33.45
KRH29690	Soybean	nucleus	32.03	32.94
KRH44733	Soybean	nucleus	22.6	32.63
KRH40267	Soybean	nucleus	35.61	30.98
KRH00957	Soybean	nucleus	31.87	27.64

Protein Annotations

EntrezGene:100812275	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02000658	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ncoils:Coil	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_01G195900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7K4R6
EnsemblPlants:KRH77164	ProteinID:KRH77164	ProteinID:KRH77164.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296A0FF	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:52990036..52993781

Molecular Weight (calculated)

69429.3 Da

IEP (calculated)

7.570

GRAVY (calculated)

-0.728

Length

615 amino acids

Sequence
(BLAST)

001: MKPIENGNTV SINYQNSWLG FSLSPQMNIG VPSHLHQTQP SSAAVEAVPP NFYHHTPLHN YGLYYELEGE HVGMSSSLPI MPLKSNASLS GIEALSRSQA
101: QATTTISAMH SSLNSMLINE LLCHGLNNPN NLNHVQEDIS QQQFSYYSTL RNQDVILEGS KHQLPCIAED ENPGLKSWFS RDFHARHAEE SRMIVPLECN
201: GGESGSIGSI TYGDLHSSNL SVSPTSGSSS VTSSPALTNT VATNTKKRWL EMVDQNQKQI VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCKKE
301: GQGRKGRQVY LGGYDMEEKA ARAYDMAALK YWGPSSHINF PLENYQNELE EMKNMTRQEY VAHLRRKSSG FSRGASMYRG VTRSQRHHQH GRWQARIGRV
401: AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG VNAVTNFDIT RYDVEKIMES NNLLSSEQAK RKREMDDGTR SEATVNQKPS TYDHTQETIL MQKRCKNQSE
501: WKMVQFPCPQ QLDQNQRIES CRTQPFSTDL DNMFRHQVEE RSNMGTHLSN PSSLVTSLSS SREESPDKTS MPMLFGMPST VSKLLANVDS WDLSSNLRTA
601: LSMPQMPIFA AWTDA

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.