CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011782.1-P	Field mustard	nucleus	99.09	99.63
CDX69324	Canola	nucleus	97.63	96.4
AT4G37750.1	Thale cress	nucleus	89.23	88.11
CDY50260	Canola	nucleus	89.96	88.04
CDY44027	Canola	nucleus	89.23	87.48
CDY71263	Canola	nucleus	52.01	87.42
CDX72655	Canola	endoplasmic reticulum, golgi	50.18	82.34
GSMUA_Achr8P26510_001	Banana	nucleus	37.77	61.24
CDY33356	Canola	nucleus	18.98	54.17
PGSC0003DMT400055210	Potato	nucleus	27.19	52.1
Os07t0124700-01	Rice	nucleus	30.11	49.85
CDY18032	Canola	nucleus	26.28	49.66
GSMUA_Achr3P15150_001	Banana	nucleus	48.36	48.09
CDY72251	Canola	nucleus	27.55	46.32
GSMUA_Achr3P30690_001	Banana	nucleus	49.27	46.31
Solyc02g092050.2.1	Tomato	nucleus	54.01	45.82
KRH58159	Soybean	nucleus	55.47	45.71
CDY72154	Canola	nucleus	27.37	45.59
CDY68782	Canola	nucleus	26.82	45.37
VIT_07s0151g00440.t01	Wine grape	nucleus	55.66	44.99
GSMUA_Achr7P27500_001	Banana	nucleus	50.55	44.97
KRH04380	Soybean	nucleus	55.29	44.3
KRH77164	Soybean	nucleus	49.63	44.23
KRH28322	Soybean	nucleus	49.09	43.95
TraesCS2D01G256600.2	Wheat	nucleus	47.99	43.83
TraesCS2B01G268100.2	Wheat	nucleus	47.99	43.83
TraesCS2A01G267600.2	Wheat	nucleus	47.63	43.43
Zm00001d007840_P001	Maize	nucleus	47.45	43.33
Zm00001d018731_P001	Maize	nucleus	47.81	42.74
CDX82142	Canola	nucleus	34.67	41.58
CDX88560	Canola	nucleus	23.36	41.42
CDY49856	Canola	nucleus	34.49	41.36
TraesCS5D01G415500.1	Wheat	nucleus	47.08	41.21
TraesCS5A01G405400.1	Wheat	nucleus	47.26	41.18
TraesCS5B01G410200.1	Wheat	nucleus	47.08	41.08
EER93382	Sorghum	nucleus	48.54	41.05
CDY35066	Canola	nucleus	24.64	40.91
Zm00001d034204_P001	Maize	nucleus	49.45	40.51
CDX78387	Canola	nucleus	29.56	40.3
HORVU5Hr1G098450.2	Barley	nucleus	45.99	39.94
CDX87360	Canola	nucleus	22.81	39.81
KXG34322	Sorghum	nucleus	48.54	39.06
CDX97022	Canola	nucleus	29.01	38.88
CDY68823	Canola	nucleus	23.36	37.76
CDY14577	Canola	nucleus	30.84	37.22
CDY29623	Canola	nucleus	35.95	35.05
CDY42263	Canola	nucleus	34.85	34.79
CDY55941	Canola	nucleus	35.4	34.77
CDX85454	Canola	nucleus	35.95	34.62
CDY16924	Canola	nucleus	23.72	34.39
CDY35571	Canola	nucleus	35.22	34.28
CDY47943	Canola	nucleus	34.67	34.23
CDY06387	Canola	nucleus	34.85	34.11
CDX73488	Canola	nucleus	25.55	33.9
CDY57915	Canola	nucleus	34.67	33.69
CDY08784	Canola	nucleus	31.02	33.27
CDX78230	Canola	plastid	25.18	33.25
CDY40102	Canola	nucleus	33.76	33.21
CDX67595	Canola	plastid	25.0	32.93
CDX69826	Canola	nucleus	33.03	32.32
CDY19597	Canola	nucleus	34.49	32.14
CDX85757	Canola	nucleus	33.58	31.78

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	GO:A0A078CKT6	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
EnsemblPlants:CDX75673	ProteinID:CDX75673	ProteinID:CDX75673.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00121601001	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF72
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0004EDE4C0	SEG:seg	:	:

Description

BnaA01g00290D

Coordinates

chrLK031804:+:2266040..2268786

Molecular Weight (calculated)

60716.4 Da

IEP (calculated)

7.864

GRAVY (calculated)

-0.647

Length

548 amino acids

Sequence
(BLAST)

001: MKSFCDNDDS NTTNLLGFSL SSNMLKMGGG EALYSSSSSS VATSSVPPQL VVGDNSSNYG VCYGSNLAAR EMYSQMSVMP LRSDGSLCLM EALNRSSHSN
101: NHHHSQVSSP KMEDFFGTHH HNTSHKEAMD LSLDSLFYNT THAPNNNTNF QEFFSFPQTR NHHEEETRNY ENDPGLTHGG GSFNVGVYGE FQQSLSLSMS
201: PGSQSSCITA SHHHQNQTQN HQQISEALVE TSAGFETTTM AAAAAKKKRG QEVVVGQKQI VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSFKKE
301: GHSRKGRQVY LGGYDMEEKA ARAYDLAALK YWGPSTHTNF SVENYQKEID DMKNMTRQEY VAHLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN
401: KDLYLGTFGT QEEAAEAYDV AAIKFRGTNA VTNFDITRYD VDRIMASNTL LSGEMARRNS NSIVVRNISD EEAALTAVVN GGSNKEVGSP ERVLSFPTIF
501: ALPQVGPKMF GANVVGNMSS WTTNPNADLK TVSLTLPQMP VFAAWADS

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.