Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008040.1-P | Field mustard | nucleus | 97.93 | 64.55 |
| CDY49856 | Canola | nucleus | 99.66 | 63.24 |
| CDX82142 | Canola | nucleus | 98.28 | 62.36 |
| AT1G72570.1 | Thale cress | nucleus | 84.14 | 58.8 |
| CDY33356 | Canola | nucleus | 31.03 | 46.88 |
| CDX72655 | Canola | endoplasmic reticulum, golgi | 46.9 | 40.72 |
| CDY72251 | Canola | nucleus | 44.83 | 39.88 |
| CDY68782 | Canola | nucleus | 43.79 | 39.2 |
| CDY72154 | Canola | nucleus | 44.14 | 38.91 |
| CDX88560 | Canola | nucleus | 35.52 | 33.33 |
| CDX78387 | Canola | nucleus | 45.52 | 32.84 |
| CDX87360 | Canola | nucleus | 34.48 | 31.85 |
| CDX97022 | Canola | nucleus | 44.83 | 31.78 |
| CDY35066 | Canola | nucleus | 35.17 | 30.91 |
| CDY68823 | Canola | nucleus | 33.79 | 28.91 |
| CDY14577 | Canola | nucleus | 45.17 | 28.85 |
| CDY16924 | Canola | nucleus | 34.83 | 26.72 |
| CDX75673 | Canola | nucleus | 49.66 | 26.28 |
| CDX69324 | Canola | nucleus | 49.66 | 25.95 |
| CDY29623 | Canola | nucleus | 49.66 | 25.62 |
| CDY42263 | Canola | nucleus | 48.28 | 25.5 |
| CDY08784 | Canola | nucleus | 44.83 | 25.44 |
| CDX85454 | Canola | nucleus | 49.66 | 25.31 |
| CDY55941 | Canola | nucleus | 48.62 | 25.27 |
| CDY47943 | Canola | nucleus | 48.28 | 25.23 |
| CDY44027 | Canola | nucleus | 48.62 | 25.22 |
| CDY35571 | Canola | nucleus | 48.97 | 25.22 |
| CDY50260 | Canola | nucleus | 48.62 | 25.18 |
| CDY06387 | Canola | nucleus | 47.93 | 24.82 |
| CDX73488 | Canola | nucleus | 35.17 | 24.7 |
| CDX78230 | Canola | plastid | 35.17 | 24.58 |
| CDY57915 | Canola | nucleus | 47.24 | 24.29 |
| CDX67595 | Canola | plastid | 34.83 | 24.28 |
| CDY40102 | Canola | nucleus | 46.55 | 24.24 |
| CDX69826 | Canola | nucleus | 45.86 | 23.75 |
| CDY19597 | Canola | nucleus | 47.59 | 23.47 |
| CDX85757 | Canola | nucleus | 46.21 | 23.14 |
| CDY71263 | Canola | nucleus | 17.59 | 15.64 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078FZ36 | UniProt:A0A078FZ36 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY18032 | ProteinID:CDY18032 | ProteinID:CDY18032.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00002432001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF72 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EE1CB7 | SEG:seg | : | : | : |
Description
BnaC03g31040DBnaC03g31040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ36]
Coordinates
chrLK032080:-:721881..724320
Molecular Weight (calculated)
32522.6 Da
IEP (calculated)
7.822
GRAVY (calculated)
-0.792
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNRLSPPGY LLYEQAVSTP QYSNLDTNLS HDYGGSVSVF KSWLGQGTPT FPVSNTYVSG EGSTSNTSNF SHEETDYNTS GSTLLLTLSH GAASDLINEL
101: NVSVPVEEPV KVDEKRKSLV GKSQAKEPVE TRKSVDSLGQ RTSQYRGVTK HRWTGRYEAH LWDNSCKKEG QSRRGRQVYL GGYDDEEKAA RAYDLAAMKY
201: WGPTTHLNFP LSNYEKEIEE LNNMTRQEFV AMLRRNSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA
101: NVSVPVEEPV KVDEKRKSLV GKSQAKEPVE TRKSVDSLGQ RTSQYRGVTK HRWTGRYEAH LWDNSCKKEG QSRRGRQVYL GGYDDEEKAA RAYDLAAMKY
201: WGPTTHLNFP LSNYEKEIEE LNNMTRQEFV AMLRRNSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA
001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH
Arabidopsis Description
AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.