Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18032 | Canola | nucleus | 58.8 | 84.14 |
| Bra008040.1-P | Field mustard | nucleus | 78.8 | 74.32 |
| CDX82142 | Canola | nucleus | 79.28 | 71.99 |
| CDY49856 | Canola | nucleus | 79.28 | 71.99 |
| AT1G79700.2 | Thale cress | nucleus | 29.16 | 38.66 |
| AT1G16060.1 | Thale cress | nucleus | 29.64 | 35.65 |
| AT5G65510.2 | Thale cress | nucleus | 42.41 | 35.34 |
| AT4G37750.1 | Thale cress | nucleus | 46.02 | 34.41 |
| AT1G51190.1 | Thale cress | nucleus | 45.06 | 32.92 |
| AT3G20840.1 | Thale cress | nucleus | 45.06 | 32.58 |
| AT5G57390.1 | Thale cress | nucleus | 43.37 | 32.26 |
| AT5G17430.1 | Thale cress | nucleus | 45.06 | 32.02 |
| AT5G10510.3 | Thale cress | nucleus | 41.45 | 28.48 |
| AT3G54320.1 | Thale cress | plastid | 29.4 | 27.85 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | EntrezGene:843589 | ProteinID:AAG51860.1 | ProteinID:AEE35343.1 | InterPro:AP2-like_transcript_factor |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G72570 | EnsemblPlantsGene:AT1G72570 | RefSeq:AT1G72570 | TAIR:AT1G72570 |
| RefSeq:AT1G72570-TAIR-G | EnsemblPlants:AT1G72570.1 | TAIR:AT1G72570.1 | EMBL:AY603417 | Unigene:At.50661 | ncoils:Coil |
| InterPro:DNA-bd_dom_sf | EMBL:DQ446422 | EMBL:DQ652930 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009873 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_177401.2 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR32467 | PANTHER:PTHR32467:SF72 | UniProt:Q1PFE1 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0000D5BC40 |
| SEG:seg | : | : | : | : | : |
Description
AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
Coordinates
chr1:+:27331381..27333698
Molecular Weight (calculated)
47135.5 Da
IEP (calculated)
7.077
GRAVY (calculated)
-0.830
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.