Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007066.1-P | Field mustard | plastid | 78.08 | 83.01 |
| CDX78230 | Canola | plastid | 78.54 | 82.89 |
| CDX73488 | Canola | nucleus | 77.85 | 82.57 |
| Bra003178.1-P | Field mustard | plastid | 76.71 | 81.36 |
| CDX67595 | Canola | plastid | 77.17 | 81.25 |
| Os01t0813300-00 | Rice | nucleus | 22.15 | 76.38 |
| VIT_13s0047g00340.t01 | Wine grape | plastid | 43.38 | 51.21 |
| GSMUA_Achr8P09350_001 | Banana | plastid | 41.55 | 50.28 |
| AT1G79700.2 | Thale cress | nucleus | 35.62 | 49.84 |
| KRH13193 | Soybean | nucleus | 44.52 | 47.33 |
| PGSC0003DMT400070735 | Potato | nucleus | 46.58 | 47.0 |
| Zm00001d005016_P005 | Maize | plastid | 42.69 | 46.98 |
| Solyc01g096860.1.1 | Tomato | nucleus | 46.8 | 46.28 |
| KRH44733 | Soybean | nucleus | 44.98 | 46.24 |
| EES09182 | Sorghum | nucleus | 44.06 | 45.95 |
| AT1G16060.1 | Thale cress | nucleus | 35.39 | 44.93 |
| TraesCS5D01G150500.1 | Wheat | plastid | 42.24 | 43.33 |
| HORVU5Hr1G045290.10 | Barley | nucleus, plastid | 42.92 | 43.12 |
| TraesCS5A01G141700.1 | Wheat | plastid | 41.78 | 42.76 |
| Os12t0126300-00 | Rice | nucleus | 43.38 | 42.6 |
| GSMUA_Achr3P03630_001 | Banana | plastid | 39.04 | 41.3 |
| GSMUA_Achr3P09410_001 | Banana | nucleus | 33.33 | 40.78 |
| TraesCS4B01G136400.1 | Wheat | plastid | 30.14 | 40.0 |
| KXG33588 | Sorghum | plastid | 34.47 | 37.84 |
| Zm00001d052405_P002 | Maize | plastid | 37.21 | 37.47 |
| TraesCS4D01G131200.1 | Wheat | plastid | 29.91 | 36.9 |
| TraesCS3B01G368400.1 | Wheat | plastid | 32.19 | 36.62 |
| TraesCS3D01G330400.1 | Wheat | plastid | 31.51 | 36.6 |
| TraesCS4A01G181300.1 | Wheat | plastid | 29.91 | 36.29 |
| Zm00001d043116_P002 | Maize | nucleus | 33.56 | 31.82 |
| AT1G72570.1 | Thale cress | nucleus | 27.85 | 29.4 |
| AT5G65510.2 | Thale cress | nucleus | 29.22 | 25.7 |
| AT4G37750.1 | Thale cress | nucleus | 31.28 | 24.68 |
| AT1G51190.1 | Thale cress | nucleus | 31.96 | 24.65 |
| AT3G20840.1 | Thale cress | nucleus | 31.51 | 24.04 |
| AT5G17430.1 | Thale cress | nucleus | 31.74 | 23.8 |
| AT5G57390.1 | Thale cress | nucleus | 30.14 | 23.66 |
| AT5G10510.3 | Thale cress | nucleus | 29.0 | 21.03 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | EntrezGene:824599 | ProteinID:AEE79213.1 | ProteinID:AEE79215.1 | InterPro:AP2-like_transcript_factor |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT3G54320 | EnsemblPlantsGene:AT3G54320 | RefSeq:AT3G54320 | TAIR:AT3G54320 |
| RefSeq:AT3G54320-TAIR-G | EnsemblPlants:AT3G54320.1 | TAIR:AT3G54320.1 | EMBL:AY254038 | EMBL:AY560888 | EMBL:AY885245 |
| ProteinID:CAB81797.1 | ProteinID:CAB81798.1 | ncoils:Coil | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006109 | GO:GO:0006110 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009744 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0019432 | GO:GO:1901959 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_001030857.1 | RefSeq:NP_191000.3 | PFAM:PF00847 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF20 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00005DC221 | Symbol:WRI1 | SEG:seg | : | : |
Description
WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
Coordinates
chr3:+:20114684..20118627
Molecular Weight (calculated)
49304.8 Da
IEP (calculated)
4.907
GRAVY (calculated)
-0.798
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLF QGLFVGSE
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLF QGLFVGSE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.