Factsheet for TraesCS3D01G330400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G368400.1	Wheat	plastid	92.31	90.39
Os01t0813300-00	Rice	nucleus	23.34	69.29
TraesCS4D01G131200.1	Wheat	plastid	58.36	61.97
KXG33588	Sorghum	plastid	50.93	48.12
Zm00001d043116_P002	Maize	nucleus	51.72	42.21
GSMUA_Achr3P09410_001	Banana	nucleus	33.16	34.92
Bra007066.1-P	Field mustard	plastid	35.54	32.52
CDX73488	Canola	nucleus	35.54	32.45
CDX78230	Canola	plastid	35.54	32.29
VIT_13s0047g00340.t01	Wine grape	plastid	31.57	32.08
Bra003178.1-P	Field mustard	plastid	35.01	31.96
CDX67595	Canola	plastid	35.01	31.73
TraesCS5D01G150500.1	Wheat	plastid	35.81	31.62
AT3G54320.1	Thale cress	plastid	36.6	31.51
TraesCS5D01G229400.1	Wheat	nucleus	32.89	31.31
KRH13193	Soybean	nucleus	33.95	31.07
KRH44733	Soybean	nucleus	33.95	30.05
PGSC0003DMT400070735	Potato	nucleus	33.69	29.26
TraesCS7D01G091100.1	Wheat	nucleus	31.57	29.02
Solyc01g096860.1.1	Tomato	nucleus	33.69	28.67
TraesCS4D01G182100.1	Wheat	nucleus	28.12	28.19
TraesCS1D01G362500.1	Wheat	nucleus	30.24	27.74
TraesCS7D01G483200.1	Wheat	nucleus	28.65	23.03
TraesCS2D01G506500.1	Wheat	nucleus	28.65	22.69
TraesCS4D01G291300.1	Wheat	nucleus	29.71	21.29
TraesCS6D01G205300.1	Wheat	nucleus	33.69	19.21
TraesCS2D01G256600.2	Wheat	nucleus	29.97	18.83
TraesCS2D01G357600.1	Wheat	nucleus	31.57	18.17
TraesCS5D01G415500.1	Wheat	nucleus	29.97	18.05
TraesCS4D01G237300.2	Wheat	nucleus	29.44	17.59
TraesCS3D01G389100.1	Wheat	nucleus	31.83	16.04

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS3D01G330400	EnsemblPlants:TraesCS3D01G330400.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:442971488..442973787

Molecular Weight (calculated)

41560.6 Da

IEP (calculated)

8.542

GRAVY (calculated)

-0.692

Length

377 amino acids

Sequence
(BLAST)

001: MVTMTATKKQ PCRGAASLSS ASSWPWGSRI APSIARTHGR KKKKSGRGGS GSGDAVVVPA RRSSVYKGVT RHSISGRYEA HLWDRHCRST AQGRRGKQGC
101: YKTEEEAART HDLAALKCWG SDCGLLNFPV DTYRQERERM QRMTREEYLA RLRRNSSGFT RGVSKYRGVT RHHANGRWEA RIGYAAGTQY SYLGIFETQE
201: EAARAYDLAA IRIRGPGAVT NFDADCYVDI PQPLPCKAEP DPEPAAARPG PPAPLPPKVE PKEEPENDFE FEREPPPAPA LREDADRVDR AIAEVLQALC
301: VDRADFEARY PPRRARVAAA GAGWPTPSAW DELPDLPVPG DAGFFEDDIE SVLFDAPGDA ELPRAAVISS LASGRWW

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.