Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G229500.1 | Wheat | nucleus | 95.16 | 95.45 |
TraesCS6B01G252000.1 | Wheat | nucleus | 94.4 | 94.26 |
HORVU6Hr1G057060.3 | Barley | nucleus | 91.68 | 92.94 |
Zm00001d017207_P001 | Maize | nucleus | 80.03 | 78.25 |
KXG30667 | Sorghum | nucleus | 81.24 | 77.83 |
TraesCS2D01G357600.1 | Wheat | nucleus | 63.69 | 64.27 |
GSMUA_Achr2P05880_001 | Banana | nucleus | 45.99 | 53.15 |
CDY68782 | Canola | nucleus | 25.87 | 52.78 |
CDY72251 | Canola | nucleus | 25.26 | 51.23 |
CDY72154 | Canola | nucleus | 25.26 | 50.76 |
TraesCS4D01G182100.1 | Wheat | nucleus | 27.38 | 48.14 |
KRH24688 | Soybean | nucleus | 38.28 | 45.75 |
TraesCS7D01G483200.1 | Wheat | nucleus | 32.38 | 45.63 |
VIT_06s0004g01800.t01 | Wine grape | nucleus | 37.67 | 45.27 |
Solyc11g061750.1.1 | Tomato | nucleus | 36.31 | 43.8 |
PGSC0003DMT400035354 | Potato | nucleus | 36.46 | 43.74 |
CDY06387 | Canola | nucleus | 36.76 | 43.39 |
Bra031234.1-P | Field mustard | nucleus | 36.16 | 42.91 |
CDY57915 | Canola | nucleus | 36.61 | 42.91 |
Bra018899.1-P | Field mustard | nucleus | 36.01 | 42.58 |
AT3G20840.1 | Thale cress | nucleus | 36.91 | 42.51 |
AT1G51190.1 | Thale cress | nucleus | 36.46 | 42.43 |
Bra030451.1-P | Field mustard | nucleus | 36.01 | 42.2 |
CDY29623 | Canola | nucleus | 35.7 | 41.99 |
CDY35571 | Canola | nucleus | 35.55 | 41.74 |
KRH29690 | Soybean | nucleus | 37.67 | 41.64 |
CDY19597 | Canola | nucleus | 36.31 | 40.82 |
TraesCS4D01G291300.1 | Wheat | nucleus | 32.22 | 40.49 |
TraesCS2D01G506500.1 | Wheat | nucleus | 28.74 | 39.92 |
TraesCS3D01G389100.1 | Wheat | nucleus | 42.21 | 37.3 |
TraesCS2D01G256600.2 | Wheat | nucleus | 32.38 | 35.67 |
TraesCS5D01G229400.1 | Wheat | nucleus | 21.33 | 35.61 |
TraesCS5D01G415500.1 | Wheat | nucleus | 32.98 | 34.82 |
TraesCS4D01G237300.2 | Wheat | nucleus | 33.13 | 34.71 |
TraesCS7D01G091100.1 | Wheat | nucleus | 21.03 | 33.9 |
TraesCS3D01G330400.1 | Wheat | plastid | 19.21 | 33.69 |
Bra023921.1-P | Field mustard | nucleus | 23.75 | 33.62 |
TraesCS1D01G362500.1 | Wheat | nucleus | 20.42 | 32.85 |
TraesCS4D01G131200.1 | Wheat | plastid | 17.4 | 32.39 |
TraesCS5D01G150500.1 | Wheat | plastid | 20.73 | 32.08 |
Protein Annotations
MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
PANTHER:PTHR32467 | PANTHER:PTHR32467:SF48 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6D01G205300 | EnsemblPlants:TraesCS6D01G205300.1 |
TIGR:cd00018 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:291231800..291236371
Molecular Weight (calculated)
70632.2 Da
IEP (calculated)
6.084
GRAVY (calculated)
-0.593
Length
661 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGNDWLGF SLSGQENPQP HQDSPPPAGI DISGASDFYG VPTQPAPDAQ LGVPGHQPSY GITEDFNRGA HETHDWNMRG DLDYNGGASE LSMLVGSSAV
101: GGKRAAMEAE TEPKLEDFLG CNSFVSEQDQ AGGFLFSGVP MTTSSNSNTG SNTMELSMIK SWLRDNQLPQ APHPQSQTGA PAQQPQPHEE MGTDASSFDP
201: RGRNGALVVA GSSQSLALSM STGSGSHLPM AVVSGSASGG VSESTSSENK RASGAMDSPG GAVEAVARKS IDTFGQRTSI YRGVTRHRWT GRYEAHLWDN
301: SCRREGQSRK GRQVYLGGYD KEDKAARAYD LAALKYWGTT TTTNFPINTY EKEVDEMKHM TRQEYIAYLR RNSSGFSRGA SKYRGVTRHH QHGRWQARIG
401: RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVKTIL ESSTLPVGGA ARRLKEAADH PEAGATIWRA GMDGAIISQL TDVGMGAYAS
501: YHHGWPTIAF QQPSPLSVHY PYVAQPPRGW CKPEQDATVA TQSLQDLQQL HLGTAAHNYF QASSSSTVYN GGGVGGYQQG TGGNAFLMPA STVVDEQGHS
601: STAANQGSTC SYGDEEGKLN LGYDAMAMAS TGADPYAAAS TVSIARANGY SNNWSSPFSG M
101: GGKRAAMEAE TEPKLEDFLG CNSFVSEQDQ AGGFLFSGVP MTTSSNSNTG SNTMELSMIK SWLRDNQLPQ APHPQSQTGA PAQQPQPHEE MGTDASSFDP
201: RGRNGALVVA GSSQSLALSM STGSGSHLPM AVVSGSASGG VSESTSSENK RASGAMDSPG GAVEAVARKS IDTFGQRTSI YRGVTRHRWT GRYEAHLWDN
301: SCRREGQSRK GRQVYLGGYD KEDKAARAYD LAALKYWGTT TTTNFPINTY EKEVDEMKHM TRQEYIAYLR RNSSGFSRGA SKYRGVTRHH QHGRWQARIG
401: RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVKTIL ESSTLPVGGA ARRLKEAADH PEAGATIWRA GMDGAIISQL TDVGMGAYAS
501: YHHGWPTIAF QQPSPLSVHY PYVAQPPRGW CKPEQDATVA TQSLQDLQQL HLGTAAHNYF QASSSSTVYN GGGVGGYQQG TGGNAFLMPA STVVDEQGHS
601: STAANQGSTC SYGDEEGKLN LGYDAMAMAS TGADPYAAAS TVSIARANGY SNNWSSPFSG M
001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
Arabidopsis Description
PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.