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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G229500.1 Wheat nucleus 95.16 95.45
TraesCS6B01G252000.1 Wheat nucleus 94.4 94.26
HORVU6Hr1G057060.3 Barley nucleus 91.68 92.94
Zm00001d017207_P001 Maize nucleus 80.03 78.25
KXG30667 Sorghum nucleus 81.24 77.83
TraesCS2D01G357600.1 Wheat nucleus 63.69 64.27
GSMUA_Achr2P05880_001 Banana nucleus 45.99 53.15
CDY68782 Canola nucleus 25.87 52.78
CDY72251 Canola nucleus 25.26 51.23
CDY72154 Canola nucleus 25.26 50.76
TraesCS4D01G182100.1 Wheat nucleus 27.38 48.14
KRH24688 Soybean nucleus 38.28 45.75
TraesCS7D01G483200.1 Wheat nucleus 32.38 45.63
VIT_06s0004g01800.t01 Wine grape nucleus 37.67 45.27
Solyc11g061750.1.1 Tomato nucleus 36.31 43.8
PGSC0003DMT400035354 Potato nucleus 36.46 43.74
CDY06387 Canola nucleus 36.76 43.39
Bra031234.1-P Field mustard nucleus 36.16 42.91
CDY57915 Canola nucleus 36.61 42.91
Bra018899.1-P Field mustard nucleus 36.01 42.58
AT3G20840.1 Thale cress nucleus 36.91 42.51
AT1G51190.1 Thale cress nucleus 36.46 42.43
Bra030451.1-P Field mustard nucleus 36.01 42.2
CDY29623 Canola nucleus 35.7 41.99
CDY35571 Canola nucleus 35.55 41.74
KRH29690 Soybean nucleus 37.67 41.64
CDY19597 Canola nucleus 36.31 40.82
TraesCS4D01G291300.1 Wheat nucleus 32.22 40.49
TraesCS2D01G506500.1 Wheat nucleus 28.74 39.92
TraesCS3D01G389100.1 Wheat nucleus 42.21 37.3
TraesCS2D01G256600.2 Wheat nucleus 32.38 35.67
TraesCS5D01G229400.1 Wheat nucleus 21.33 35.61
TraesCS5D01G415500.1 Wheat nucleus 32.98 34.82
TraesCS4D01G237300.2 Wheat nucleus 33.13 34.71
TraesCS7D01G091100.1 Wheat nucleus 21.03 33.9
TraesCS3D01G330400.1 Wheat plastid 19.21 33.69
Bra023921.1-P Field mustard nucleus 23.75 33.62
TraesCS1D01G362500.1 Wheat nucleus 20.42 32.85
TraesCS4D01G131200.1 Wheat plastid 17.4 32.39
TraesCS5D01G150500.1 Wheat plastid 20.73 32.08
Protein Annotations
MapMan:15.5.7.3Gene3D:3.30.730.10InterPro:AP2-like_transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfncoils:Coil
InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0006139GO:GO:0006355GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987InterPro:IPR001471InterPro:IPR036955PFAM:PF00847PRINTS:PR00367PFscan:PS51032
PANTHER:PTHR32467PANTHER:PTHR32467:SF48SMART:SM00380SUPFAM:SSF54171EnsemblPlantsGene:TraesCS6D01G205300EnsemblPlants:TraesCS6D01G205300.1
TIGR:cd00018SEG:seg::::
Description
No Description!
Coordinates
chr6D:+:291231800..291236371
Molecular Weight (calculated)
70632.2 Da
IEP (calculated)
6.084
GRAVY (calculated)
-0.593
Length
661 amino acids
Sequence
(BLAST)
001: MASGNDWLGF SLSGQENPQP HQDSPPPAGI DISGASDFYG VPTQPAPDAQ LGVPGHQPSY GITEDFNRGA HETHDWNMRG DLDYNGGASE LSMLVGSSAV
101: GGKRAAMEAE TEPKLEDFLG CNSFVSEQDQ AGGFLFSGVP MTTSSNSNTG SNTMELSMIK SWLRDNQLPQ APHPQSQTGA PAQQPQPHEE MGTDASSFDP
201: RGRNGALVVA GSSQSLALSM STGSGSHLPM AVVSGSASGG VSESTSSENK RASGAMDSPG GAVEAVARKS IDTFGQRTSI YRGVTRHRWT GRYEAHLWDN
301: SCRREGQSRK GRQVYLGGYD KEDKAARAYD LAALKYWGTT TTTNFPINTY EKEVDEMKHM TRQEYIAYLR RNSSGFSRGA SKYRGVTRHH QHGRWQARIG
401: RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVKTIL ESSTLPVGGA ARRLKEAADH PEAGATIWRA GMDGAIISQL TDVGMGAYAS
501: YHHGWPTIAF QQPSPLSVHY PYVAQPPRGW CKPEQDATVA TQSLQDLQQL HLGTAAHNYF QASSSSTVYN GGGVGGYQQG TGGNAFLMPA STVVDEQGHS
601: STAANQGSTC SYGDEEGKLN LGYDAMAMAS TGADPYAAAS TVSIARANGY SNNWSSPFSG M
Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)
001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
Arabidopsis Description
PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.