Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G220400.2 | Wheat | nucleus | 97.98 | 97.73 |
| TraesCS5A01G221600.1 | Wheat | nucleus | 97.22 | 97.22 |
| Os09t0423800-01 | Rice | nucleus | 79.8 | 86.58 |
| OQU89519 | Sorghum | plastid | 73.48 | 73.67 |
| Zm00001d020540_P002 | Maize | plastid | 75.76 | 72.99 |
| CDY33356 | Canola | nucleus | 32.83 | 67.71 |
| KRH47304 | Soybean | nucleus | 49.49 | 67.59 |
| VIT_09s0018g01650.t01 | Wine grape | plastid | 58.84 | 64.54 |
| KRH44591 | Soybean | plastid | 50.0 | 63.26 |
| VIT_11s0037g00870.t01 | Wine grape | plastid | 55.05 | 62.82 |
| KRH63091 | Soybean | plastid | 54.8 | 62.54 |
| CDX88560 | Canola | nucleus | 48.23 | 61.81 |
| KRH55024 | Soybean | plastid | 54.55 | 61.54 |
| Bra035137.1-P | Field mustard | nucleus | 47.73 | 61.36 |
| AT1G79700.2 | Thale cress | nucleus | 47.73 | 60.38 |
| CDX87360 | Canola | nucleus | 46.72 | 58.92 |
| KRH72352 | Soybean | nucleus | 54.29 | 58.9 |
| Solyc03g117720.2.1 | Tomato | nucleus, plastid | 54.55 | 58.22 |
| Solyc12g010490.1.1 | Tomato | plastid | 53.28 | 57.97 |
| CDY35066 | Canola | nucleus | 48.23 | 57.88 |
| KRH02994 | Soybean | nucleus | 54.04 | 57.84 |
| AT1G16060.1 | Thale cress | nucleus | 50.25 | 57.68 |
| Bra026082.1-P | Field mustard | nucleus | 47.98 | 57.58 |
| GSMUA_Achr5P04670_001 | Banana | nucleus | 51.52 | 56.67 |
| Solyc06g068570.2.1 | Tomato | nucleus | 44.95 | 56.51 |
| PGSC0003DMT400087745 | Potato | nucleus | 41.67 | 56.12 |
| TraesCS7D01G091100.1 | Wheat | nucleus | 45.71 | 44.15 |
| TraesCS1D01G362500.1 | Wheat | nucleus | 44.19 | 42.58 |
| TraesCS5D01G150500.1 | Wheat | plastid | 39.9 | 37.0 |
| TraesCS4D01G131200.1 | Wheat | plastid | 31.06 | 34.65 |
| TraesCS4D01G182100.1 | Wheat | nucleus | 32.07 | 33.78 |
| TraesCS3D01G330400.1 | Wheat | plastid | 31.31 | 32.89 |
| TraesCS7D01G483200.1 | Wheat | nucleus | 35.1 | 29.64 |
| TraesCS2D01G506500.1 | Wheat | nucleus | 31.57 | 26.26 |
| TraesCS4D01G291300.1 | Wheat | nucleus | 33.59 | 25.29 |
| TraesCS2D01G256600.2 | Wheat | nucleus | 35.35 | 23.33 |
| TraesCS5D01G415500.1 | Wheat | nucleus | 35.61 | 22.52 |
| TraesCS4D01G237300.2 | Wheat | nucleus | 34.09 | 21.39 |
| TraesCS6D01G205300.1 | Wheat | nucleus | 35.61 | 21.33 |
| TraesCS2D01G357600.1 | Wheat | nucleus | 34.09 | 20.61 |
| TraesCS3D01G389100.1 | Wheat | nucleus | 35.86 | 18.98 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 |
| PANTHER:PTHR32467:SF20 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5D01G229400 | EnsemblPlants:TraesCS5D01G229400.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:336422548..336426224
Molecular Weight (calculated)
42975.0 Da
IEP (calculated)
7.090
GRAVY (calculated)
-0.523
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPRKNSAA AAAAAAANSN ASAAADAGAD VRAKPKKRTR KSVPRESPSQ RSSVHRGVTR HRWTGRFEAH LWDKNSWNES QNKKGKQVYL GAYDEEEAAA
101: RAYDLAALKY WGPDTILNFP LSIYEEELKE MEGQSREEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ EEAAMAYDMA
201: AIEYRGLNAV TNFDLSRYIK WLRPGAADVA AGAGRSAHPM LAGLAAQELP AIDLDAMAFQ HDLHQQGMED GMAAEAAAAA AGTAQFPLLP ARASTLGHTP
301: TTSALSLLLQ SPKFKEMIER TSAAESSTTT SSSSMSTPPP PQATRDDGAS PQCSFPEDIQ TFFGSDDGVA YTDVDGLFFG DLSAYASPAF QFELDL
101: RAYDLAALKY WGPDTILNFP LSIYEEELKE MEGQSREEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ EEAAMAYDMA
201: AIEYRGLNAV TNFDLSRYIK WLRPGAADVA AGAGRSAHPM LAGLAAQELP AIDLDAMAFQ HDLHQQGMED GMAAEAAAAA AGTAQFPLLP ARASTLGHTP
301: TTSALSLLLQ SPKFKEMIER TSAAESSTTT SSSSMSTPPP PQATRDDGAS PQCSFPEDIQ TFFGSDDGVA YTDVDGLFFG DLSAYASPAF QFELDL
001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
Arabidopsis Description
ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.