CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020540_P002	Maize	plastid	83.8	80.54
Os09t0423800-01	Rice	nucleus	72.41	78.36
TraesCS5D01G229400.1	Wheat	nucleus	73.67	73.48
TraesCS5B01G220400.2	Wheat	nucleus	73.42	73.05
TraesCS5A01G221600.1	Wheat	nucleus	73.16	72.98
CDY33356	Canola	nucleus	32.15	66.15
KRH47304	Soybean	nucleus	47.59	64.83
KRH44591	Soybean	plastid	49.11	61.98
KRH63091	Soybean	plastid	53.42	60.81
VIT_11s0037g00870.t01	Wine grape	plastid	53.16	60.52
VIT_09s0018g01650.t01	Wine grape	plastid	55.19	60.39
KRH55024	Soybean	plastid	53.42	60.11
AT1G79700.2	Thale cress	nucleus	46.84	59.11
CDX88560	Canola	nucleus	45.82	58.58
Bra035137.1-P	Field mustard	nucleus	45.57	58.44
CDX87360	Canola	nucleus	45.82	57.64
Solyc03g117720.2.1	Tomato	nucleus, plastid	53.16	56.6
Solyc12g010490.1.1	Tomato	plastid	52.15	56.59
Bra026082.1-P	Field mustard	nucleus	46.84	56.06
CDY35066	Canola	nucleus	46.84	56.06
AT1G16060.1	Thale cress	nucleus	48.86	55.94
KRH72352	Soybean	nucleus	51.39	55.62
Solyc06g068570.2.1	Tomato	nucleus	44.3	55.56
KRH02994	Soybean	nucleus	51.39	54.86
PGSC0003DMT400087745	Potato	nucleus	40.76	54.76
GSMUA_Achr5P04670_001	Banana	nucleus	49.11	53.89
OQU80549	Sorghum	nucleus	49.11	44.09
EES19874	Sorghum	nucleus	43.04	38.37
EES09182	Sorghum	nucleus	40.51	38.1
EER89186	Sorghum	nucleus	43.04	34.84
KXG33588	Sorghum	plastid	34.94	34.59
EER88761	Sorghum	nucleus	34.94	29.11
KXG39508	Sorghum	extracellular, nucleus	29.37	27.17
KXG27285	Sorghum	nucleus	31.65	25.61
OQU93137	Sorghum	nucleus	31.9	22.07
KXG39831	Sorghum	nucleus	31.65	20.26
KXG30667	Sorghum	nucleus	34.68	19.86
EER93382	Sorghum	nucleus	32.15	19.6
KXG33917	Sorghum	nucleus	34.68	19.49
KXG34322	Sorghum	nucleus	33.16	19.24

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1W0W536	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:OQU89519	ProteinID:OQU89519	ProteinID:OQU89519.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF20	SMART:SM00380	EnsemblPlantsGene:SORBI_3002G206400
SUPFAM:SSF54171	UniParc:UPI0003C6E7C6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:59795208..59801685

Molecular Weight (calculated)

42973.0 Da

IEP (calculated)

9.785

GRAVY (calculated)

-0.707

Length

395 amino acids

Sequence
(BLAST)

001: MAKPRKNSAA ANNNNSSSNG AGDLTPRAKP KRTRKSVPRE SPTQRSSVYR GVTRHRWTGR FEAHLWDKNS WNESQNKKGK QGAYDDEEAA ARAYDLAALK
101: YWGPDTILNF PASAYEGEMK GMEGQSREEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT QEEAAMAYDM AAIEYRGLNA
201: VTNFDLSRYI KWLRPGAGGM AAAAAAAQNP HPMLGGLAQQ LLLPPPADTT TTDGAGAAAF QHDHHGAEAF PLPPRTSLGH TPTTSALSLL LQSPKFKEMI
301: QRTESGTTTT TTTTSSLSSS PPPTPSPSPP RRSPAPTQPP VQAAARDASP HQRGFPEDVQ TFFGCEDTAG IDVEALFFGD LAAYATPAFH FEMDL

Best Arabidopsis Sequence Match ( AT1G16060.1 )
(BLAST)

001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC

Arabidopsis Description

ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.