Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045378_P001 | Maize | nucleus | 79.92 | 79.43 |
| Os06t0145700-00 | Rice | nucleus | 46.93 | 71.12 |
| TraesCS7A01G095100.1 | Wheat | nucleus | 59.22 | 70.83 |
| TraesCS7D01G091100.1 | Wheat | nucleus | 58.61 | 69.76 |
| TraesCS4A01G395400.1 | Wheat | nucleus | 58.4 | 69.68 |
| VIT_14s0108g00050.t01 | Wine grape | nucleus | 42.21 | 50.99 |
| KRH40131 | Soybean | nucleus | 39.14 | 48.72 |
| KRH01131 | Soybean | nucleus | 38.73 | 48.21 |
| Solyc06g066390.1.1 | Tomato | nucleus | 39.55 | 47.65 |
| PGSC0003DMT400006170 | Potato | nucleus | 38.73 | 46.55 |
| EES19874 | Sorghum | nucleus | 42.01 | 46.28 |
| Solyc08g076380.1.1 | Tomato | nucleus | 38.93 | 43.68 |
| OQU89519 | Sorghum | plastid | 34.84 | 43.04 |
| EES09182 | Sorghum | nucleus | 30.12 | 35.0 |
| OQU80549 | Sorghum | nucleus | 30.53 | 33.86 |
| KXG33588 | Sorghum | plastid | 26.43 | 32.33 |
| KXG39508 | Sorghum | extracellular, nucleus | 25.0 | 28.57 |
| EER88761 | Sorghum | nucleus | 27.25 | 28.06 |
| KXG27285 | Sorghum | nucleus | 25.41 | 25.41 |
| OQU93137 | Sorghum | nucleus | 25.61 | 21.89 |
| KXG39831 | Sorghum | nucleus | 27.05 | 21.39 |
| EER93382 | Sorghum | nucleus | 26.84 | 20.22 |
| KXG30667 | Sorghum | nucleus | 28.28 | 20.0 |
| KXG34322 | Sorghum | nucleus | 27.25 | 19.53 |
| KXG33917 | Sorghum | nucleus | 27.66 | 19.2 |
Protein Annotations
| MapMan:15.5.7.3 | MapMan:26.9.2.2 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| UniProt:C5Z3X0 | InterPro:DNA-bd_dom_sf | EnsemblPlants:EER89186 | ProteinID:EER89186 | ProteinID:EER89186.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF73 | SMART:SM00380 |
| EnsemblPlantsGene:SORBI_3010G035100 | SUPFAM:SSF54171 | UniParc:UPI0001A89B07 | RefSeq:XP_002437819.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:2829617..2832359
Molecular Weight (calculated)
51484.7 Da
IEP (calculated)
7.280
GRAVY (calculated)
-0.529
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: METYSLQVKD ELHGGGIGIG GGGQGLYCGA TPRPAAPAAT GGGGGGGDGA VKSNKRSRKR EPPPPPPSSL VTMSNGGKDE AVAGSGDKSA SSNSNASKRS
101: SRFRGVSRHR WTGRFEAHLW DKGTWNPTQK KKGKQVYLGA YNEEDAAARA YDLAALKYWG PTTYTNFPVV DYERELKVMQ NVSKEEYLAS IRRKSNGFSR
201: GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AARAYDIAAI EYRGINAVTN FDLSTYIRWL KPGGGVEDSA AGTPTSGVRA PGIPPASLSL
301: QAGGLLQHPH GAAAGMLQVD VDDLYRGQLA AARGAALFSG GIDDVGSVYA AGSAGPSPTA LCAGRPSPSP SPSSSTTALS LLLRSSVFQE LVARNAGGGA
401: AQQQQLVVAD DDGAVSPADV VDAKVEQPEA EGELGRHGDQ LYGAARADED EDAFACSMYE LDDSFARMEQ SLWGCLRSSD APDNMNNL
101: SRFRGVSRHR WTGRFEAHLW DKGTWNPTQK KKGKQVYLGA YNEEDAAARA YDLAALKYWG PTTYTNFPVV DYERELKVMQ NVSKEEYLAS IRRKSNGFSR
201: GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AARAYDIAAI EYRGINAVTN FDLSTYIRWL KPGGGVEDSA AGTPTSGVRA PGIPPASLSL
301: QAGGLLQHPH GAAAGMLQVD VDDLYRGQLA AARGAALFSG GIDDVGSVYA AGSAGPSPTA LCAGRPSPSP SPSSSTTALS LLLRSSVFQE LVARNAGGGA
401: AQQQQLVVAD DDGAVSPADV VDAKVEQPEA EGELGRHGDQ LYGAARADED EDAFACSMYE LDDSFARMEQ SLWGCLRSSD APDNMNNL
001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLF QGLFVGSE
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLF QGLFVGSE
Arabidopsis Description
WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.