Factsheet for Os06t0145700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0813300-00	Rice	nucleus	27.64	70.08
Os03t0176300-00	Rice	mitochondrion	33.85	64.12
TraesCS4A01G395400.1	Wheat	nucleus	71.12	55.99
TraesCS7A01G095100.1	Wheat	nucleus	70.5	55.64
TraesCS7D01G091100.1	Wheat	nucleus	70.81	55.61
EER89186	Sorghum	nucleus	71.12	46.93
Zm00001d045378_P001	Maize	nucleus	69.57	45.62
Os09t0423800-01	Rice	nucleus	49.38	43.56
KRH01131	Soybean	nucleus	52.17	42.86
KRH40131	Soybean	nucleus	52.17	42.86
VIT_14s0108g00050.t01	Wine grape	nucleus	53.11	42.33
Solyc06g066390.1.1	Tomato	nucleus	52.17	41.48
Os05t0536250-00	Rice	nucleus	53.42	39.91
PGSC0003DMT400006170	Potato	nucleus	49.38	39.16
Solyc08g076380.1.1	Tomato	nucleus	50.0	37.01
Os08t0442400-01	Rice	nucleus	46.27	35.56
Os12t0126300-00	Rice	nucleus	42.86	30.94
Os07t0124700-01	Rice	nucleus	31.68	30.82
Os03t0313100-01	Rice	extracellular, nucleus	33.54	25.06
Os06t0657500-02	Rice	nucleus	36.34	24.95
Os04t0653600-01	Rice	nucleus	36.02	23.43
Os02t0614300-01	Rice	mitochondrion, nucleus	22.36	22.43
Os11t0295900-01	Rice	nucleus	35.4	20.39
Os04t0504500-01	Rice	nucleus	38.51	18.84
Os01t0899800-01	Rice	nucleus	38.51	17.84
Os03t0232200-01	Rice	nucleus	35.09	17.6
Os03t0770700-01	Rice	plastid	5.9	5.6

Protein Annotations

MapMan:15.5.7.3	MapMan:26.9.2.2	Gene3D:3.30.730.10	UniProt:A0A0P0WSD2	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAS96133.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os06g0145700	EnsemblPlants:Os06t0145700-00
PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF73	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000393C0CC	SEG:seg	:	:	:	:

Description

APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 99Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os06t0145700-00)

Coordinates

chr6:-:2399691..2401993

Molecular Weight (calculated)

35516.2 Da

IEP (calculated)

5.835

GRAVY (calculated)

-0.446

Length

322 amino acids

Sequence
(BLAST)

001: VIYIFCHKSR HRWTGRFEAH LWDKGTWNPT QKKKGKQVYL GAYNEEDAAA RAYDLAALKY WGPTTYTNFP VADYEKELKL MQGVSKEEYL ASIRRKSNGF
101: SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGINAV TNFDLSTYIR WLKPPSSSSA AGTPHHHGGG MVVGADRVLA
201: PAQSYPISAA ADDDVAGCWR PLPSPSSSTT TALSLLLRSS MFQELVARQP VVEGDDGQLA VVSGDDADAD ADSDVKEPPP ESEYGEVFAS DEAAAAAAYG
301: CSMYELDDSF ALIDDSVWNC LI

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.