Factsheet for Os11t0295900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	26.83	88.24
Os01t0813300-00	Rice	nucleus	14.13	62.2
Os06t0657500-02	Rice	nucleus	40.43	48.19
CDY68823	Canola	nucleus	27.73	45.72
PGSC0003DMT400041881	Potato	nucleus	38.82	42.38
Os04t0653600-01	Rice	nucleus	37.39	42.22
CDY16924	Canola	nucleus	28.44	42.06
Os07t0124700-01	Rice	nucleus	24.33	41.09
Os03t0313100-01	Rice	extracellular, nucleus	31.31	40.6
CDX85454	Canola	nucleus	40.61	39.89
Bra013978.1-P	Field mustard	nucleus	41.14	39.72
CDY55941	Canola	nucleus	39.36	39.43
AT5G17430.1	Thale cress	nucleus	41.14	39.38
Os02t0614300-01	Rice	mitochondrion, nucleus	21.82	38.01
Os04t0504500-01	Rice	nucleus	43.83	37.23
Solyc11g008560.1.1	Tomato	nucleus	44.19	36.48
Bra023617.1-P	Field mustard	nucleus	34.88	36.38
Os06t0145700-00	Rice	nucleus	20.39	35.4
Os01t0899800-01	Rice	nucleus	44.01	35.4
Os09t0423800-01	Rice	nucleus	22.72	34.79
KRH00957	Soybean	nucleus	39.71	31.31
Os03t0232200-01	Rice	nucleus	35.78	31.15
Os05t0536250-00	Rice	nucleus	23.97	31.09
Os08t0442400-01	Rice	nucleus	23.26	31.03
Os12t0126300-00	Rice	nucleus	23.97	30.04
Os03t0770700-01	Rice	plastid	12.7	20.94

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	EntrezGene:4350315	UniProt:A0A0N7KSS8	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAT13658.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os11g0295900	EnsemblPlants:Os11t0295900-01
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0001C7B13E	RefSeq:XP_015616214.1	SEG:seg	:	:

Description

PLETHORA 6Similar to ASGR-BBM-like1. (Os11t0295900-01)

Coordinates

chr11:+:10863409..10868622

Molecular Weight (calculated)

59978.3 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.512

Length

559 amino acids

Sequence
(BLAST)

001: MASITNWLGF SSSSFSGAGA DPVLPHPPLQ EWGSAYEGGG TVAAAGGEET AAPKLEDFLG MQVQQETAAA AAGHGRGGSS SVVGLSMIKN WLRSQPPPAV
101: VGGEDAMMAL AVSTSASPPV DATVPACISP DGMGSKAADG GGAAEAAAAA AAQRMKAAMD TFGQRTSIYR GVTKHRWTGR YEAHLWDNSC RREGQTRKGR
201: QVYLGGYDKE EKAARAYDLA ALKYWGTTTT TNFPVSNYEK ELDEMKHMNR QEFVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT
301: FGTQEEAAEA YDIAAIKFRG LNAVTNFDMS RYDVKSIIES SNLPIGTGTT RRLKDSSDHT DNVMDINVNT EPNNVVSSHF TNGVGNYGSQ HYGYNGWSPI
401: SMQPIPSQYA NGQPRAWLKQ EQDSSVVTAA QNLHNLHHFS SLGYTHNFFQ QSDVPDVTGF VDAPSRSSDS YSFRYNGTNG FHGLPGGISY AMPVATAVDQ
501: GQGIHGYGED GVAGIDTTHD LYGSRNVYYL SEGSLLADVE KEGDYGQSVG GNSWVLPTP

Best Arabidopsis Sequence Match ( AT5G17430.1 )
(BLAST)

001: MNSMNNWLGF SLSPHDQNHH RTDVDSSTTR TAVDVAGGYC FDLAAPSDES SAVQTSFLSP FGVTLEAFTR DNNSHSRDWD INGGACNNIN NNEQNGPKLE
101: NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP
401: VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS
501: YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT

Arabidopsis Description

BBMBABY BOOM [Source:UniProtKB/TrEMBL;Acc:A7L9U1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.